Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3817 ATGGCAATAGAATGCATAACAAGCATGCCTCAACAACTACTAAACCAAGAAACCAAAGAACAAGAAAAGCCACTAGTTTTTGATGCATCAGTTCTCAAACACCAAGTTAATCTACCAACACAGTTCATTTGGCCTGATGAAGAACAAGCTTGTTTAAACGTACCTGAACTTCATGTACCATTCATTGATTTGGGAGGTTTTCTCTCCGGTGATCCAGTTGCAGCAATGGAAGCATCAAAGGTTGTTGGTGAAGCTTGTAAAAAACATGGTTTTTTTCTTGTTGTCAATCATGGAATTGATGAAAAGTTGATATCTGATGCTCATGCTTTCATGGATGATTTTTTTGAGCTTCCCCTTTCTCAGAAACAGAGAGCTCAGAGAAAAACAGGGGAGCACTGTGGTTATGCTAGTAGTTTCACTGGCAGATTCTCTTCCAAGCTTCCTTGGAAAGAGACACTTTCCTTTCAATTCTCAGCTGATGAAAAATCACCAAACCTTGTCAGAGACTATTTGTGCAACACAATGGGCAATGAGTTTGAGAAATTTGGGGAGGTTTATCAAGACTACTGCAAAGCTATGAGCAATCTTTCTTTAGGTATAATGGAGATTCTAGGAATGAGCCTTGGAGTTGGTAAAGCTCATTTTAGGGAATTTTTTGAAGAGAATAGTTCAATAATGAGGCTCAATTACTATCCTACTTGTCAAAAACCTGAGCTCACTCTAGGCACTGGACCTCATTGTGATCCAACATCTTTAACCATTCTTCACCAGGATCAAGTAGGTGGCTTGCAAGTTTATGTTGACGATCAATGGCATTCCATTAGCCCACATTTCAATGCTTTTGTTGTCAATATTGGTGATACTTTCATGGCACTTTCAAATGGGAGATACAAGAGCTGTTTGCATAGGGCAGTGGTAAACAGCGAAAAGACAAGGAAATCTCTTGCTTTCTTTTTGTGTCCATTAAGTGATAAAGTGGTAACTCCACCATGTGAATTGGTGGACAATTACAACCCAAGGATCTACCCTGATTTCACATGGTCTATGTTGCTTGAGTTTACTCAGAAGCACTACAGAGCTGATATCAAAACACTTGAAGCATTTGCCAAGTGGGTTCAATGTAAAAGCACATGA 1134 0.3933 MAIECITSMPQQLLNQETKEQEKPLVFDASVLKHQVNLPTQFIWPDEEQACLNVPELHVPFIDLGGFLSGDPVAAMEASKVVGEACKKHGFFLVVNHGIDEKLISDAHAFMDDFFELPLSQKQRAQRKTGEHCGYASSFTGRFSSKLPWKETLSFQFSADEKSPNLVRDYLCNTMGNEFEKFGEVYQDYCKAMSNLSLGIMEILGMSLGVGKAHFREFFEENSSIMRLNYYPTCQKPELTLGTGPHCDPTSLTILHQDQVGGLQVYVDDQWHSISPHFNAFVVNIGDTFMALSNGRYKSCLHRAVVNSEKTRKSLAFFLCPLSDKVVTPPCELVDNYNPRIYPDFTWSMLLEFTQKHYRADIKTLEAFAKWVQCKST* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3817 377 Pfam 2OG-Fe(II) oxygenase superfamily 224 321 IPR044861 -
Mtr1g3817 377 PANTHER ISOPENICILLIN N SYNTHASE-RELATED 16 374 - -
Mtr1g3817 377 Pfam non-haem dioxygenase in morphine synthesis N-terminal 59 165 IPR026992 -
Mtr1g3817 377 Gene3D - 29 359 IPR027443 -
Mtr1g3817 377 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 16 374 - -
Mtr1g3817 377 SUPERFAMILY Clavaminate synthase-like 31 361 - -
Mtr1g3817 377 PRINTS Isopenicillin N synthase signature 82 99 - -
Mtr1g3817 377 PRINTS Isopenicillin N synthase signature 246 267 - -
Mtr1g3817 377 PRINTS Isopenicillin N synthase signature 281 307 - -
Mtr1g3817 377 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 222 321 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3817 Mtr-Chr1 49747647 49750240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3817 18 359 Glycosyltransferase AT5G59530 29.060 3.96e-32 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3817 K05282 - gmx:100816992 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3817 1 49747647 49750240 Mtr1g3817 1 49747647 49750240 ECH
Mtr6g1576 6 28201399 28203335 Mtr1g3817 1 49747647 49750240 PCT