Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1475 ATGTCTGGGAGAGATCTAGAGAGAGATGGAGGGAACAAGAACAACAACAATCATGCATATGCTGTTCCACCAACTTCAAGTGGTTATGATCCAGAAACTAGTTGGACATCATGGCTTGTACCTATGTTTGTTGTGGCTAATCTTGTTGTTTTTGTTGTAGCTATGTATATTAATAATTGTCCTAGTAAAAATCTTGGTTTTGATGGTGCTTGTGTTTTGAAGTTTCTTGGGAGATTCTCTTTTCAGCCTTTGAAAGAGAATCCTTTGCTTGGTCCTTCTTCGGAAACACTAACGAAGATGGGAGCCCTTAAGTGGGATGCTGTTGTGAATCATCACCAAGGATGGAGACTTGTCTCATGCATTTGGTTACATGCTGGAATCATTCATTTGGCAGCAAACATGATCAGTCTGGTCTTCATTGGAATTCGCCTCGAACAACAATTTGGGTTCGTGAGGATAGGAATCGTTTACCTAGTATCTGGATTCGGCGGGAGCATACTATCTGCTCTATTCATTAGAAAAAGCATCTCCGTTGGGGCTTCCGGTGCTCTTTTTGGACTTCTTGGAGCCATGCTTTCAGAACTTATCACAAACTGGAGCATTTACACTAATAAAGTAGCTGCTCTGATGACACTTCTCTTTATTATTGTCATCAATCTGGTGATTGGAATGTTGCCACATGTCGACAATTTCGCTCATATTGGGGGATTCTTGACAGGATTTCTCCTTGGTTTCATTTTCCTTCCCCGTCCTCAATTTGGTTGGTTAGCACAGCGACACGTTCCTGCTGGTGTTCGCCTCAAGTCTAAGTACAAGGTTTACCAATATGTTCTTTGGGTTGTATCTCTTGTACTATTGATTGCTGGGTTATGCATTGGTTTAGTGATGCTATTGCGGGGCGAAAGTGGATATGACCACTGCCATTGGTGTCACTACCTGACATGTGTTCCAACTTCTAAATGGAAATGCGATGACAGCTAA 981 0.42 MSGRDLERDGGNKNNNNHAYAVPPTSSGYDPETSWTSWLVPMFVVANLVVFVVAMYINNCPSKNLGFDGACVLKFLGRFSFQPLKENPLLGPSSETLTKMGALKWDAVVNHHQGWRLVSCIWLHAGIIHLAANMISLVFIGIRLEQQFGFVRIGIVYLVSGFGGSILSALFIRKSISVGASGALFGLLGAMLSELITNWSIYTNKVAALMTLLFIIVINLVIGMLPHVDNFAHIGGFLTGFLLGFIFLPRPQFGWLAQRHVPAGVRLKSKYKVYQYVLWVVSLVLLIAGLCIGLVMLLRGESGYDHCHWCHYLTCVPTSKWKCDDS* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1475 326 SUPERFAMILY Rhomboid-like 36 252 IPR035952 -
Mtr6g1475 326 Pfam Rhomboid family 110 251 IPR022764 GO:0004252|GO:0016021
Mtr6g1475 326 Gene3D - 32 250 IPR035952 -
Mtr6g1475 326 PANTHER RHOMBOID-RELATED 1 325 IPR002610 GO:0004252|GO:0006508|GO:0016021
Mtr6g1475 326 MobiDBLite consensus disorder prediction 13 29 - -
Mtr6g1475 326 PANTHER RHOMBOID-LIKE PROTEIN 3 1 325 - -
Mtr6g1475 326 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1475 Mtr-Chr6 24619784 24624516 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1475 - - gmx:100813345 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3784 1 49407151 49409608 Mtr6g1475 6 24619784 24624516 ECH
Mtr6g1475 6 24619784 24624516 Mtr6g1475 6 24619784 24624516 ECH