Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3784 ATGGACAACAAAAAAATGAATCCTAGGAGAGATGTTGAAAGTGGCAGGACAAAAAACAATTGTTCCTATGTTTATGTTGCTGAGACTCATAGAGAGTCATGCTCATGGCTTGTACCTGCTTTTGTGTTTGTTAATATTGTTGTTTTCATTGTGGTCATGGGCATCAACAATTGTCCTAACACCACTTTTGGTTTTCATAAACATCATCATCATTGTGTTGCTAGGTTTCTTCACAGGTTCTCTTTTCAGCCTTTTAGGGAGAATCCATTGCTTGGTCCTTCTTCCTTAACATTAATCAAGATGGGAGCTCTTAGATGGGTTAATGTTGTGCACCAGCATCAGGAATGGAGACTTTTCACTTGCATTTGGTTACATGCTGGAATTATTCACTTGCTATCAAACATGTTATGCCTGGTCTTGATCGGCATTCGCCTCGAGCAACAATTCGGGTTTGTGAAGATTGGATTGATATACCTATTGTCTGGATTTGGAGGGAGTGTATTTTCTTCAATTTTTATCAGAAATAGCATTTCTGTTGGGGCTTCCAGTGCTCTTTTTGGACTCCTTGGAGCAATGATATCAGAACTTCTTACAAATTGGACTATATACTCCAACAAAGTGATGGCATTGCTCACCCTTCTTGTTATGATTGCCATCAACCTCACTATTGGCCTTTTGCCGCGCGTTGATAACCTTGCTCACATTGGAGGACTTGTGGTAGGTTTTTTACTTGGTTTCATTTTGCTACCGCGTCCTCAATATGATGGTGTTCTCCGGAAATCAAAATACAATGCTTACCAATTTGTTCTAGGGATTGTGTCTCTAGTTCTCTTGACTGCTGGGTTATCATTTGGATTAGTGATGCTGTTCAGGGGTGAGAATGGATATGATCACTGCCATTGGTGTCACTACCTAACATGTGTGCCAAGTTCCAGATGGGAATGCAACAGTAACACTTAA 960 0.4031 MDNKKMNPRRDVESGRTKNNCSYVYVAETHRESCSWLVPAFVFVNIVVFIVVMGINNCPNTTFGFHKHHHHCVARFLHRFSFQPFRENPLLGPSSLTLIKMGALRWVNVVHQHQEWRLFTCIWLHAGIIHLLSNMLCLVLIGIRLEQQFGFVKIGLIYLLSGFGGSVFSSIFIRNSISVGASSALFGLLGAMISELLTNWTIYSNKVMALLTLLVMIAINLTIGLLPRVDNLAHIGGLVVGFLLGFILLPRPQYDGVLRKSKYNAYQFVLGIVSLVLLTAGLSFGLVMLFRGENGYDHCHWCHYLTCVPSSRWECNSNT* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3784 319 Gene3D - 29 251 IPR035952 -
Mtr1g3784 319 SUPERFAMILY Rhomboid-like 34 253 IPR035952 -
Mtr1g3784 319 PANTHER RHOMBOID-LIKE PROTEIN 3 10 318 - -
Mtr1g3784 319 Pfam Rhomboid family 110 252 IPR022764 GO:0004252|GO:0016021
Mtr1g3784 319 PANTHER RHOMBOID-RELATED 10 318 IPR002610 GO:0004252|GO:0006508|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3784 Mtr-Chr1 49407151 49409608 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3784 - - gmx:100784224 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3784 1 49407151 49409608 Mtr6g1475 6 24619784 24624516 ECH
Mtr1g3784 1 49407151 49409608 Mtr1g3784 1 49407151 49409608 ECH