Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1236 ATGGAAACACCATTGCTGACCAAAAGATTTACTTCAGAAAATGATTACTTGGCAGTGAAAAGTTTGAAGGATGTTAAACATGTTTTGTGGAGTGAGACAGTGAAGATATGGAAGATAGCACTTCCAGTGGCTTTGTGTTATTTGTTTCAATACCTCACAAACACTTCAACTTCCATCTATGCTGGTCATCTTGGAGATATTGAACTCTCTTCTTTCTCTCTTTTTCAAAGTGTCCTCAATTGCATCTATTCTTTGCTGTTTGGTATGTCAACGGCAATAGCAACACTGTGTGGCCAAGCTTATGGTGCAGGACAATTTCAAAATGCTGGTATTTATGTTCAAAGATCAAGTATTATACTCTTCACCACTTGTATACTCCTATTGCCAATTAATATATATGCAACTCCAATCTTAAAATTTCTTGGCCAAGAACAAGAAATAGCTGACCTAGCTGGCAAATATGCTATTCTTATAATTCCATACATGTTTTCCAGTGCTATCCATTTACCCATCCAGAAATTTCTTCAAGCACAAAGTGAAGTTAAAGTTATTATGTACATAGCAATTGTGATATTGCTAATACAAAATGGTCTACTTTATATCTTCATTTCTGTATTTGATTGGGGAATAACTGGCTTAGCTATGGCAAGTAATATCACAGGATGGGGATTTGCAATTGCTCAACTAATTTATGCCATTGGTTGGTGTAAAGAAGGATGGAATGGATTGTCTTGGATGGCATTTAGAGAATTATGGGAATTTACTAAGCTAAGTTTTGGTTCATCTGTAATGATTTGTTTAGAACAGTGGTATACTACAATCATTATCCTTCTTGCTGGCTATCTTGATAATCCTGTGATTGCTCTTGGTTCATATTCAATTTGCCTTAATATTCAGGGTTGGAATGCCATGCTGCTTCTTGGACTAAGTACAGCACTAAGTGTTCGTGTCTCTAATACACTTGGCATGTCACATCCAAGAGCATCCAAGTACTCTTTCTTGGTGACAATGTCTCAGTCTCTTCTCATTGGAACCATTTTCATGACTGTTATTTTCTTGAGTAAAGAAAAGTTTGCATTCATCTTTACCAACAGTGATGATTTGATACATGCTGCAAGTGAATTAGCATACCTTCTTGGTATAACCATGGTTATCAACAGTATCTCACAAACTATTTCAGGTGTGGTCATTGGATGTGGATGGCAAGTTATGGTTGGTTACATAAACTTGGCATGTTATTATATTGTTGGACTCCCTATTGGAATTTTCCTTGGATTCAACCAGCATTTGGGTGTGAAGGGTCTTTGGGGAGGCACAATGTGCGGCAATATTCTTCAGATTTTAGTCCTCGTTGTCATTATTTATAAGACCAATTGGACCAATGAGGTAGAGCAAACAGCTAATCGCATGAGAATTTGGAGCTCTAACAAACTTCAAAAGGACGCCATTTGA 1452 0.3691 METPLLTKRFTSENDYLAVKSLKDVKHVLWSETVKIWKIALPVALCYLFQYLTNTSTSIYAGHLGDIELSSFSLFQSVLNCIYSLLFGMSTAIATLCGQAYGAGQFQNAGIYVQRSSIILFTTCILLLPINIYATPILKFLGQEQEIADLAGKYAILIIPYMFSSAIHLPIQKFLQAQSEVKVIMYIAIVILLIQNGLLYIFISVFDWGITGLAMASNITGWGFAIAQLIYAIGWCKEGWNGLSWMAFRELWEFTKLSFGSSVMICLEQWYTTIIILLAGYLDNPVIALGSYSICLNIQGWNAMLLLGLSTALSVRVSNTLGMSHPRASKYSFLVTMSQSLLIGTIFMTVIFLSKEKFAFIFTNSDDLIHAASELAYLLGITMVINSISQTISGVVIGCGWQVMVGYINLACYYIVGLPIGIFLGFNQHLGVKGLWGGTMCGNILQILVLVVIIYKTNWTNEVEQTANRMRIWSSNKLQKDAI* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1236 483 TIGRFAM matE: MATE efflux family protein 42 436 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr6g1236 483 CDD MATE_eukaryotic 32 465 IPR045069 GO:0042910|GO:1990961
Mtr6g1236 483 Pfam MatE 42 198 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr6g1236 483 Pfam MatE 262 421 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr6g1236 483 PANTHER PROTEIN DETOXIFICATION 1 474 - -
Mtr6g1236 483 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1236 Mtr-Chr6 17743470 17752217 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1236 K03327 - gmx:100813527 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1236 6 17743470 17752217 Mtr6g1236 6 17743470 17752217 ECH
Mtr6g1236 6 17743470 17752217 Mtr1g3718 1 48784429 48788248 PCT