Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0955 ATGGCAGATGGCTACTGGAACCGCCAGCAGTCTCTTCTCCCCCATTCCGGCCTGCACAAACGTCCCCGCCCTGACTACGAAATGCCAGCTTCTGGTCTTCCTTCAGGCAATGAGATGCATTATCTTTCTCGTGAAGAGGACCGTTCTGGTCACCCAATGGTCAAGGACTCAAAAACAATTGGATCTGCGTATGATCGCTACCTTCAGGGGCAAGTTCCTTCATTTACTTCTGGGGAAGCCAGTACAGTTGGTGCTCTTGGATTGCAAAGAGGTATTGGTGGATTACCGAACCATTCACTAAGCGATCCTTCTGCCATGATAGGGCGTCATGGGGGTGGTGGTCCTGATCTTGCACCAAATGGACGGGGTATGAATTATGGTTTTCAACCACCGATGGATCCAGTTTCCAGGCATGGACCTGAGCCAGCACTTCTACCCCCAGATGCTTCACCAACTCTATATATTGAAGGTCTGCCTTCTGATTGTACAAGAAGAGAAGTGGCTCACATTTTCCGTCCGTTTGTTGGATATAGAGAAGTGAGACTTGTTAGCAAAGAAGCTAAACATCGTGGAGATCCTCTGATCCTTTGTTTTGTGGACTTTGCAAATCCAGCTTGTGCAGCCACTGCTTTGAGTGCCTTGCAAGGCTATAAAGTCGATGAAATCAATCCCGAGTCTAGTCATTTGCGGCTTCAGTTTTCTCGATATCCAGGTCCAAGAAGTGGAGGTGGTCCAAGAAGTAGTGGACCTCCCAGAGGTGGACATGGATCTCGTGGTAGGAGGTGA 786 0.4898 MADGYWNRQQSLLPHSGLHKRPRPDYEMPASGLPSGNEMHYLSREEDRSGHPMVKDSKTIGSAYDRYLQGQVPSFTSGEASTVGALGLQRGIGGLPNHSLSDPSAMIGRHGGGGPDLAPNGRGMNYGFQPPMDPVSRHGPEPALLPPDASPTLYIEGLPSDCTRREVAHIFRPFVGYREVRLVSKEAKHRGDPLILCFVDFANPACAATALSALQGYKVDEINPESSHLRLQFSRYPGPRSGGGPRSSGPPRGGHGSRGRR* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0955 261 MobiDBLite consensus disorder prediction 232 261 - -
Mtr6g0955 261 SMART rrm1_1 152 225 IPR000504 GO:0003723
Mtr6g0955 261 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 153 220 IPR000504 GO:0003723
Mtr6g0955 261 Gene3D - 148 236 IPR012677 -
Mtr6g0955 261 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 151 236 IPR000504 GO:0003723
Mtr6g0955 261 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B 7 247 - -
Mtr6g0955 261 PANTHER NUCLEAR SPECKLE RNA-BINDING PROTEIN A-RELATED 7 247 - -
Mtr6g0955 261 MobiDBLite consensus disorder prediction 1 38 - -
Mtr6g0955 261 SUPERFAMILY RNA-binding domain, RBD 141 260 IPR035979 GO:0003676
Mtr6g0955 261 CDD RRM_RBPMS_like 151 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0955 Mtr-Chr6 12625714 12632739 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0955 - - cam:101512502 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0955 6 12625714 12632739 Mtr1g3670 1 48392468 48397766 PCT