Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0944 ATGAGATTTCTACCACATCGAATTCCGGATCACTATGATGATAAGAGGATTCTACGACATCGAAGTCCGGATCACTATGATGATACGAGGTTTCAACCACATCAAATTCCGGATTACTATGATGATACGAGGTTTGTACCACATCGAAGTTCGGATCACTATGATGATACGAGGTTTCAACCACATCGAATTCCGGATCACTATGATGATATGAGGTTTCAACCACATCGAAGTCCGGATCACTATGATGATACGAGGTTTCAACCACAACCACATCGAAGTCCGGATCACTATGATGATACTAGGTTTTTACCACATCGAAGTCCGGATCACTACGATGATACGAGGTTTCTGCCACATCGAAGTCCGGATCACTATGATGATACAAGGTTTTTACCACATCAAACGCCGCCATACTATCCTGATAACCGACACTTAACACATCAAAGGCCAAAACACTATGCTGATAAGAGGCCTTTACCACATCAAACACCCAAACAATTTGCTGCTAAAAGGAACTTACCACATCAGAGGCCGAAAGACTGTGCTAATAAGAGGCACTTACCACATCCATTGCCAGAAGGCAATACTGATAAGAGGCCTGCACTACCTCAAACGCCCGAAGACTTTAATTATAAAAGGATCTTACGACATCAAAAGCTAGAAGATTATGCTGATAAAATGCATTCACCACAACAAAAGCCGGAAAACTTTGCTGATAAGAGGCACACACGACAAAAAATGCCCGAAGACTTTGCTGATAAAAGGATCTTACCACATCAAAAGACGGAAGACTTTGCTGATAAAAGGGACTCACAGCATCAAAATTCGGAAGATACATGTTCCGGTCTTGATGCAATAGCAAGAGCACCACCACAAGATCCTATGATTTCCCAAAGTGACTTACGGACCAAAGAAGATGAAGGGAAAGAACACCGTGAGGTTCAGAATTGTGGTATGGAAGAATGTGCTGAGAAAGCGTGCTCGCCAAAGAGACCGGAACAACATATTATGGTTTCTCACAAGCGTTTGGAAGAGCATCATAACGGAAAGAGACATCGAAGAATGTTACGTGATATATCAAAGAAACAAAAAACTTCAAATGGAGAAGAGAGTAGACATATTCAAAATTCTCAAATGAATCCAGTAGTTCAAACACCTGACTTACCACACCAAACACCTCAAAACTATGCTGACATGAAGTGCTTACCACATCAAACGCTGGAACCAACTATTCCTGTTGTAACCACCGTTGAACTTGTACATTGTGAAACTTGCGATGTTACTGTTCCTGTCAAGTGTTTGGAAAAGCATAATGGTGGAAAGAAACATCGAAGAATGTTATCAAAACCATGTGAGCAATCAACGAATGATGGGAGTCCGGTTGAAAATATGAGTCATGAAGCTCCTAGATTCAGGTACAAGGAAGTTCCAGCTGAAGGTTCTAAAAGGAAAGTCAGAGATAACACTGATGCAAAAGGTCATGTTTTCAAGCGCGAGGTTGAAGAAAAAACAGGAGGTAAGTACATGAAGATGAATAATGGGATAAGAAGGCTCGCGAAATCATCAAAACCCGAGGTCAATGATATGTTATATTCAGCCGAATCTTTAGTCCAAATAACACCATCAGAGTATGTGGCTTCTCCTAAAATGGCATCAATCCCCGCTGAAGGATCTCTAGTACCTGTGCCTTCTCTGGTATTCACACCAGCAGCAGCTGAATTAAGTTTTGAACCGTCAATTCAGATCGATTCACAGACAGAAGTAGCAGAAGGCAAAGAACATCATGAGGTTCAGCATTATGGCGTGGAAACAAATGATCAGCCACACTCAATTTCGATGGAGTTTCATGCCCCTGCAGGTTCTGATTCTGGTGCAATAGTAATAGCACCACCACAAGCTCCCATTGCTTCTCAGGTATCCGCACCAATAGCAACATTTAAATCAAGTTTTGAATCTGAAAATCATCAAGTTATACAGACAGAAACGTCAAAAAGTAAAGTTCATAATGAAATTCAGAATCATACTGTTGATTCAAATGATCACCAACGAACAATCTCAATGGAGTTGCATGACCTTGCTGGTTCTATGACTAACAACCAAACTGATGGTGTAAATTCTGATTCTGTAGCAATAGTTGTTGAACCACTTGCATCTGCACTGCCAGACGCAGTAGGGCCAAATTTTGAACCGCTAACCGAACATGGTCTACATACTGAAACAGAACCTGAATTATCGGAAGCGGTGGTATATTACGAGAGCCAGAATCTTATTGAAGGAACAAATATTGACTTTCCACAATCAGATTCAATGAAGATTGATGGCGATTCAGAGGTCCGTACTAAAACCAAAACTGCTGATGGAAGTTCGCAAGTTGAGGAGGAGATGGATGTTCTCTCCGATGATTTGGGGAAAGTTCAGTTGCCTCAGGTTTCTGTTTGTCTTAAATGTGGTGATGAAGGCTTTGAAGAAACGTTGGTATATTGTAAGAAATGTGAAGATTGTGCACTGCATAGGTATTGTTTAGACGGGCCTGTGATTTTTACAGAAGAGGTTATTTGGTTTTGTGAAGATTGCAAAGTGGTAGACACAGAGAGTTCTGAAAAAGGCGAAGTTGATTCCAGTGAGGACTTTGTGACTGTTGCTGATCCAATCTCAGCATTGGCCTTTATTTCTTTCCTCGGAATGAAAGGATTTCAATCAAAGTATTACTTGTGGGGTGTTTTTTAA 2730 0.4099 MRFLPHRIPDHYDDKRILRHRSPDHYDDTRFQPHQIPDYYDDTRFVPHRSSDHYDDTRFQPHRIPDHYDDMRFQPHRSPDHYDDTRFQPQPHRSPDHYDDTRFLPHRSPDHYDDTRFLPHRSPDHYDDTRFLPHQTPPYYPDNRHLTHQRPKHYADKRPLPHQTPKQFAAKRNLPHQRPKDCANKRHLPHPLPEGNTDKRPALPQTPEDFNYKRILRHQKLEDYADKMHSPQQKPENFADKRHTRQKMPEDFADKRILPHQKTEDFADKRDSQHQNSEDTCSGLDAIARAPPQDPMISQSDLRTKEDEGKEHREVQNCGMEECAEKACSPKRPEQHIMVSHKRLEEHHNGKRHRRMLRDISKKQKTSNGEESRHIQNSQMNPVVQTPDLPHQTPQNYADMKCLPHQTLEPTIPVVTTVELVHCETCDVTVPVKCLEKHNGGKKHRRMLSKPCEQSTNDGSPVENMSHEAPRFRYKEVPAEGSKRKVRDNTDAKGHVFKREVEEKTGGKYMKMNNGIRRLAKSSKPEVNDMLYSAESLVQITPSEYVASPKMASIPAEGSLVPVPSLVFTPAAAELSFEPSIQIDSQTEVAEGKEHHEVQHYGVETNDQPHSISMEFHAPAGSDSGAIVIAPPQAPIASQVSAPIATFKSSFESENHQVIQTETSKSKVHNEIQNHTVDSNDHQRTISMELHDLAGSMTNNQTDGVNSDSVAIVVEPLASALPDAVGPNFEPLTEHGLHTETEPELSEAVVYYESQNLIEGTNIDFPQSDSMKIDGDSEVRTKTKTADGSSQVEEEMDVLSDDLGKVQLPQVSVCLKCGDEGFEETLVYCKKCEDCALHRYCLDGPVIFTEEVIWFCEDCKVVDTESSEKGEVDSSEDFVTVADPISALAFISFLGMKGFQSKYYLWGVF* 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0944 909 MobiDBLite consensus disorder prediction 346 360 - -
Mtr6g0944 909 MobiDBLite consensus disorder prediction 445 465 - -
Mtr6g0944 909 MobiDBLite consensus disorder prediction 344 389 - -
Mtr6g0944 909 MobiDBLite consensus disorder prediction 224 276 - -
Mtr6g0944 909 MobiDBLite consensus disorder prediction 771 791 - -
Mtr6g0944 909 MobiDBLite consensus disorder prediction 23 208 - -
Mtr6g0944 909 MobiDBLite consensus disorder prediction 767 793 - -
Mtr6g0944 909 MobiDBLite consensus disorder prediction 174 194 - -
Mtr6g0944 909 MobiDBLite consensus disorder prediction 145 160 - -
Mtr6g0944 909 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 800 886 IPR013083 -
Mtr6g0944 909 PANTHER - 810 868 - -
Mtr6g0944 909 MobiDBLite consensus disorder prediction 300 314 - -
Mtr6g0944 909 MobiDBLite consensus disorder prediction 371 389 - -
Mtr6g0944 909 ProSitePatterns Zinc finger PHD-type signature. 814 859 IPR019786 -
Mtr6g0944 909 PANTHER OS12G0161900 PROTEIN 810 868 - -
Mtr6g0944 909 MobiDBLite consensus disorder prediction 224 314 - -
Mtr6g0944 909 SUPERFAMILY FYVE/PHD zinc finger 801 861 IPR011011 -
Mtr6g0944 909 MobiDBLite consensus disorder prediction 23 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0944 Mtr-Chr6 12330405 12335173 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0944 - - mtr:MTR_6g044600 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0944 6 12330405 12335173 Mtr1g3674 1 48448405 48451303 PCT