Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3674 ATGGATATATTTGAAAATCGAAAAATAAGATTTATAAATTGGGGTTCTCCAGAGACGACAGAGGATCATCCAGCTTCCGGTTCTTGTTCGGTTTCGTTCGTTCGTTCAGTTTTCACCAAATCAAATCAAAATATAATCTTTCCAATGGAAGCTGTTTGTCTCACTTGCGGTGATGTAGGTTTTCCAGAGGCGATAGTTTTTTGCACCGAGTGTCAGGCTTGTGCTCTTCACAGGTACTGTTTAGACGGACCTGTGATTTTTACCGATGAAGTGATATGGTTTTGTGAGGACTGTGAACCAGAGGCAAAGAGATTGAAGACTAACTCTGGAAATCTGGCCAGAATTGCAATCCAATCCCGAGCAAAACTGAAATATTGCGTTAAGGGATTGAAGAAAAGCAAACAACAGAATAAAAAGGAGATGGAAGAGAAGCCATCAAAGACCCTTTCATCCAACAGTCGCTGTTCAACTGAGCTTGAGCATCCTCAATCTGATACCAGCCATAATCAAGAAAGTGAATCGAAAAATGAGTGTGGACCAGTTCCAACAGATGCAGCAAACTCCAATGTAGATTCTAAACCTGTTCAAATATCTCAAGCTACCGCCACTGATGATCTAATTATAGCATTAGAAGGTCATGTTGATGCGAAGCCTATTGCTGATCCAATCTGGAGGGGAAATTTGATCTTCTGCGATAAAAGTAAAACTATTGGTAGAGTCAATGGACTTCTGGCCCATTTGTCCAATATAGCATCCCCCAAAGTTCTGGACGAGATGAAATTCTTCCCGCATGTGCTTTCCGCAGATTTGCTTCCCAGATCTGAGGTGTGGCCTAATAGCTTCAAGGAGGAAGGACCAACTGATGAAAGCATTGCTCTTTATTTCTTTCCTGGGAATAGAAGATTATCTATAAAGGCCTTTGACAAGCTGGTTGATGATATCATTTGCACTGAAGCTGCCGTAAGAGTTGTAACTGAAAATGCAGTGCTTTTAATTTTTCCTTCTGACTTGCTTCCAATCCGACATCAGAAATTTCAAACCAAGTATTACTTGTGGGGTGTCTTCAAAAAAAAGCAAACTTCACACGAGACAAATGGTGATGTCTGCTGA 1110 0.409 MDIFENRKIRFINWGSPETTEDHPASGSCSVSFVRSVFTKSNQNIIFPMEAVCLTCGDVGFPEAIVFCTECQACALHRYCLDGPVIFTDEVIWFCEDCEPEAKRLKTNSGNLARIAIQSRAKLKYCVKGLKKSKQQNKKEMEEKPSKTLSSNSRCSTELEHPQSDTSHNQESESKNECGPVPTDAANSNVDSKPVQISQATATDDLIIALEGHVDAKPIADPIWRGNLIFCDKSKTIGRVNGLLAHLSNIASPKVLDEMKFFPHVLSADLLPRSEVWPNSFKEEGPTDESIALYFFPGNRRLSIKAFDKLVDDIICTEAAVRVVTENAVLLIFPSDLLPIRHQKFQTKYYLWGVFKKKQTSHETNGDVC* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3674 369 MobiDBLite consensus disorder prediction 173 193 - -
Mtr1g3674 369 ProSitePatterns Zinc finger PHD-type signature. 53 98 IPR019786 -
Mtr1g3674 369 PANTHER OS12G0161900 PROTEIN 49 365 - -
Mtr1g3674 369 MobiDBLite consensus disorder prediction 134 193 - -
Mtr1g3674 369 MobiDBLite consensus disorder prediction 148 163 - -
Mtr1g3674 369 SUPERFAMILY FYVE/PHD zinc finger 41 104 IPR011011 -
Mtr1g3674 369 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 38 122 IPR013083 -
Mtr1g3674 369 PANTHER - 49 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3674 Mtr-Chr1 48448405 48451303 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3674 - - mtr:MTR_1g099270 743.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3674 1 48448405 48451303 Mtr1g3674 1 48448405 48451303 ECH
Mtr6g0944 6 12330405 12335173 Mtr1g3674 1 48448405 48451303 PCT