Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0882 ATGGGAAAATTAGGGAAGAACGCACGAAAATTCGCAAAAAAAAATCTTCAATCAGTTGAAAGAAACCAAAGAAAATTAAAATCCAAATTCAAACGAAAAGCTTCTAAAGGTGATGGTCATGAAGTTGAAGAAATTGAAGAAACTGATGTTGTTGTGACAAATCCTTCAAAAACTGTTGTTGAAGAGATTCAAGATGTTTCACTTGATGCTGTTTTTAGTGATAATGATGAAACTGAGGTTCTTGGTGGTGATGATTCTGATAGTGATGGATTTCTTGAAGAGGACTCTAGCTTTGCTGATGTTACCGGAAGTGATGATGAAAATAATATTGAAAATGACAATGGTGGTAGTTCATTGTCAGCGAAAAACAGTGAAATGTTCGCAGAACTTTTGAAGAAAGAAAAGAAGTTGAACAAATTGAAAGAAAAGTTTCCAGGGTTTTCTAAATTCCTGGCAAATTATGATGATGAAGACACTGGACTATCTTCAGATGAAGAAACTGGTTCAGATGACGAAACAATGAATGATGAAAATGCACAGACTCGGGTGGGTAAAACGTTGGCAAGTGCATCTGTTGATTCTTTGTGTAAACTGGTCAAAGAACAACAAAGTTTGCCTGCCCTTACTTGTCTCATAAATGCTTATAGAGCGGCATGCCACAGTGATTCTGAAACAACCAGTGTCATTGGCAGTGTCTTATCCAATGGCGTTCAGACGAGTGAAAAATTCTGCACGATATTAATGTTCATGCTGCATGAGGCTGATAATATGTTTAGGATGTTACTCTCAATACCAAGCTCAAGTTCAAAGAAGGAAGCTGTTTTGGATCTAAAGAATAAAGCTAAATGGTTATCTCTTAGACCTCTTATTAAGTCATACTTAAGGAATACCGTATTTCTCTTGAACCAGATCACCGACTCTGAGATATTATCCTTCTCTATTTGTCGACTCAGAGCTTCAATGATCTTTCTGGCTGCATTTCCATCTTTACTGCACAAGCTTGTCAAGATTTGTGTTGATCTCTGGGTAACAGGTGATACATCTCTGTCATCACACTCCTTTCTTATGATACGAGATATAGCATCTATGTGTAGCTCTAAGTGGTTAGACATCTGTTTTGTCAAAACATACAAGGCCTTCATCGGTCGCCCTCAATCTGCACATACAAATTTTCTAAGGAACTCCTTTGTGGAGCTATGCTCTTTAGACGTGCAGAAGTCTTCAAACAAAGCAATGACATGCATAAGGCGTCTAGGTGACATATTGCTGAAGGGGTGGCAAACGAAAAAGAAGGAGGTGGTTAATAAAATTTGTAGTTGGCAGTACATCAATTGTATTGATCTTTGGGTTGCGTTTATATCGGAAAACATACACGACTATGATCTTCAACCATTGTTGTATATGATTGCTCAAATTACAAATGGAGTTGCTCTCCTCTTTCCTGGGCCTAGATATTTGCCACTGAGAGTCAGATGTATCCAATGGCTTAATCGTCTTGCCGGTTCTAGTGGGATTTTCATCCCTGTTACATCATTCGTGCTGGATTTTCTCGAATACAATATTACCAAGGATGGTGGGAAACCTGGAAAAGATTTTGAATTTGAACCTTTGTCTACCGTGAAGCTTCCAAAGCATTGGTTAAAATCACGTGAGTTCCAAGAAGAGTGTGTCTCATCTACCATTGAACTTCTTTCAGAGCATTTTTCACAATGGAGCTACCATGTATCTTTTCCCGAACTGGCAACAGCTCCACTTGTCTACCTTAAGAAGATAGTTGAAAAGACCTCTAATGAGAGTTTCAAACGAGTTATCAAGCGTTTCATTGATCAGGTGGAGTTGAATGTTGACCTTGTGCAAAAGAAAAGAGATGATGTGCCTTTCTCACCGAAGGACCAGCAGTCTGTCGAAACGTTTCTTCAGGCTGAGAAACGTAGTGGTAATAATTCATTTATGCAATACTACAAAAGCATCATGCGCAAGGCTGCTTCCAGGAAAGCGATTTCAAAGAGGAAGAAGTCTCCAGGCAAAGGAAAGAAAAAGAGAAAGCAGCATCCAAATGGCGTTGTTGATGGCAACCCTACTGATTCTGGAAAGAAAAAGAAAACGCAACATCCCAATGGCGTTGTTGATGGCAACCCTACTGATTCTGTAAAGAATTGA 2160 0.3894 MGKLGKNARKFAKKNLQSVERNQRKLKSKFKRKASKGDGHEVEEIEETDVVVTNPSKTVVEEIQDVSLDAVFSDNDETEVLGGDDSDSDGFLEEDSSFADVTGSDDENNIENDNGGSSLSAKNSEMFAELLKKEKKLNKLKEKFPGFSKFLANYDDEDTGLSSDEETGSDDETMNDENAQTRVGKTLASASVDSLCKLVKEQQSLPALTCLINAYRAACHSDSETTSVIGSVLSNGVQTSEKFCTILMFMLHEADNMFRMLLSIPSSSSKKEAVLDLKNKAKWLSLRPLIKSYLRNTVFLLNQITDSEILSFSICRLRASMIFLAAFPSLLHKLVKICVDLWVTGDTSLSSHSFLMIRDIASMCSSKWLDICFVKTYKAFIGRPQSAHTNFLRNSFVELCSLDVQKSSNKAMTCIRRLGDILLKGWQTKKKEVVNKICSWQYINCIDLWVAFISENIHDYDLQPLLYMIAQITNGVALLFPGPRYLPLRVRCIQWLNRLAGSSGIFIPVTSFVLDFLEYNITKDGGKPGKDFEFEPLSTVKLPKHWLKSREFQEECVSSTIELLSEHFSQWSYHVSFPELATAPLVYLKKIVEKTSNESFKRVIKRFIDQVELNVDLVQKKRDDVPFSPKDQQSVETFLQAEKRSGNNSFMQYYKSIMRKAASRKAISKRKKSPGKGKKKRKQHPNGVVDGNPTDSGKKKKTQHPNGVVDGNPTDSVKN* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0882 719 MobiDBLite consensus disorder prediction 78 94 - -
Mtr6g0882 719 Coils Coil 9 29 - -
Mtr6g0882 719 Pfam Noc2p family 369 656 IPR005343 -
Mtr6g0882 719 MobiDBLite consensus disorder prediction 661 719 - -
Mtr6g0882 719 MobiDBLite consensus disorder prediction 1 47 - -
Mtr6g0882 719 PANTHER NOC2P FAMILY 1 705 - -
Mtr6g0882 719 PANTHER NUCLEOLAR COMPLEX 2 AND RAD4-RELATED 1 705 IPR005343 -
Mtr6g0882 719 MobiDBLite consensus disorder prediction 102 120 - -
Mtr6g0882 719 MobiDBLite consensus disorder prediction 74 120 - -
Mtr6g0882 719 MobiDBLite consensus disorder prediction 662 683 - -
Mtr6g0882 719 Coils Coil 123 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0882 Mtr-Chr6 11271906 11279144 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0882 K14833 - gmx:100810517 906.746
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3563 1 47354583 47364309 Mtr6g0882 6 11271906 11279144 PCT