Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3563 ATGGGTGGCATTTGTTCAAGATCATGGAAAGCAACTGTAGATGGTGTAGCTGTAGATAATGTACCTGGTGAAAGCTCGAGACATTCGGCTAATGGTCATGCTGGTAATAATAATGACGCCGGAACGACGACTTATCAGCCTATTTCTTCAAATATTAATAGTAATTCACATCTGCCACCTCTTGCTGATGAGTTGGATAAGCATCAACGGGAGCCGTTTTCTTTTACCGGACCGGAAAAGGTTCCGTATGGGCCGGGCGCGGAAGATATTAATGATGGGATTCCTCGCCTGCCGAGGTCATTATCGCATAAATCTAGAAAGACTGTTAAGGTATCAGAAGTGAGTTCCCTTTTGGGCAGAGCTGGTACAGCCGGGCTTGGCAAGGCAGTAGATGTTTTGGACACACTAGGTAGCAGTATGACAAATTTGAATATCAGTAGTGGTTTTACATCGGGAGTTACAACAAAAGGAAATAAGATTTCAATTTTGGCCTTCGAAGTTGCAAACACAATAGTTAAGGGTGCCAATCTAATGCAATCCCTTTCAAAAGAGAACATTAAGCATTTAAAAGAGGTGGTTCTACCATCTGAAGGAGTGCAAAATTTGGTATCTACTGATATGACTGAACTCCTTAGAATTGCTGCAGCAGACAAGAGAGAAGAATTGAAAATATTTTCCGGTGAAGTTGTGCGTTTTGGAAATCGATGCAAAGATCCCCAGTGGCACAACCTGGAACGCTATTTTGAGAAGTTAGGTTCAGAGCTTTCACCACAAAGGCAATTGAAAGAGGAGGCAGAGATGGTGATGCAACAATTAATGACCTTTGTTCAATATACCGCCGAATTATATCATGAATTGCATGCCTTAGACAGGTTTGATCAAGATTATCGACGCAAGCTTCAAGAAGAGGACAATTCAAATGCCACACAGAGAGGAGACAGCCTTGCAATTTTAAAAGCTGAACTGAAGAGTCAAAAGAAGCATGTAAGAAATTTGAAGAAAAAGTCACTATGGTCCAAGATTTTGGAAGAGGTGATGGAAAAGCTTGCAGATATTGTCCATTTTCTATATTTGGAGATACACGAAGCATTTGGCAGTGCTGATACATATAAGCAAGTGAAAGATTCTCATAGCACGTTGGGGGCTGCTGGTCTTGCTTTGCATTATGCAAACATTATCACTCAAATTGATACTCTGGTGTCTCGATCAGGTTCTGTGCCTCCTAATACTAGGGATGCTTTATATCAAGGGCTGCCGCCAAATGTAAAATCAGCTTTGCGCTCAAGGTTACAGTCATTTCAGGTTAAAGAAGAGCTTACTGTCCCACAAATCAAAGCTGAAATGGAGAAAACATTGCAATGGCTTGTTCCTATTGCTACCAACACAACAAAAGCTCATCATGGCTTTGGATGGGTTGGAGAATGGGCAAATACAGGGTCTGATGTCAACCGTAAACCTGCGGGCCAGTCGGACTTGTTGAGAATCGAAACACTACATCATGCTGATAAAGATAAAACAGAAGTGTATATGCTTGAATTGGTTGTCTGGTTACATCACCTAGTCAGCCAAGTAAGAATTGTTAATGGAGGAATAAGGTCTCCGGTCAAATCTCCGATTCGTTCTCCAAACCAGAAGACGGCGCAGCTGTTTACGCAAAAAGGCGGCTCTACTTCCCCCTTGTTAACAATCGAAGATCAACAAATGCTTCGAGACGTTGGTAAGAGGAAACTAACGCCAGGCATCAGTAAGAGCCAGGAATTTGCAACTGCCAAGACTAGGTTGAGCAAACACCATAGGCTAAGCAAGAGTAGTAATCATTCCCCTATCAGTGAAACTAAAAACGATATATTCTCGACAAGGCGGCTACCTTCTGTTCCTGTCATCGACTTTGATATTGACCGAATGAAGGCTTTGGATGTCATTGATAGGGTGGATACCATTTGA 1944 0.4218 MGGICSRSWKATVDGVAVDNVPGESSRHSANGHAGNNNDAGTTTYQPISSNINSNSHLPPLADELDKHQREPFSFTGPEKVPYGPGAEDINDGIPRLPRSLSHKSRKTVKVSEVSSLLGRAGTAGLGKAVDVLDTLGSSMTNLNISSGFTSGVTTKGNKISILAFEVANTIVKGANLMQSLSKENIKHLKEVVLPSEGVQNLVSTDMTELLRIAAADKREELKIFSGEVVRFGNRCKDPQWHNLERYFEKLGSELSPQRQLKEEAEMVMQQLMTFVQYTAELYHELHALDRFDQDYRRKLQEEDNSNATQRGDSLAILKAELKSQKKHVRNLKKKSLWSKILEEVMEKLADIVHFLYLEIHEAFGSADTYKQVKDSHSTLGAAGLALHYANIITQIDTLVSRSGSVPPNTRDALYQGLPPNVKSALRSRLQSFQVKEELTVPQIKAEMEKTLQWLVPIATNTTKAHHGFGWVGEWANTGSDVNRKPAGQSDLLRIETLHHADKDKTEVYMLELVVWLHHLVSQVRIVNGGIRSPVKSPIRSPNQKTAQLFTQKGGSTSPLLTIEDQQMLRDVGKRKLTPGISKSQEFATAKTRLSKHHRLSKSSNHSPISETKNDIFSTRRLPSVPVIDFDIDRMKALDVIDRVDTI* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3563 647 PANTHER OS01G0873900 PROTEIN 1 647 IPR045021 GO:0045927
Mtr1g3563 647 Pfam Domain of unknown function (DUF3475) 162 218 IPR021864 GO:0045927
Mtr1g3563 647 MobiDBLite consensus disorder prediction 24 45 - -
Mtr1g3563 647 Pfam Protein of unknown function (DUF668) 379 464 IPR007700 GO:0045927
Mtr1g3563 647 Coils Coil 315 335 - -
Mtr1g3563 647 MobiDBLite consensus disorder prediction 19 45 - -
Mtr1g3563 647 PANTHER - 1 647 - -
Mtr1g3563 647 MobiDBLite consensus disorder prediction 587 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3563 Mtr-Chr1 47354583 47364309 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3563 - - gmx:100812676 1074.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3563 1 47354583 47364309 Mtr1g3563 1 47354583 47364309 ECH
Mtr1g3563 1 47354583 47364309 Mtr6g0882 6 11271906 11279144 PCT