Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3435 ATGGTAGCTAGAATCAAGCAGAGTGTTACCGAGTCTCGTAAATCAACAAAATCAGTGGTTGGAGAGATTGACACTAATTCACCTATTCAATCTGTTAAAGATGCTGTTTCTCTATTCGGTGAAGCTGCTTTGTCTGCTGGGAATGTTACCATTAAGAAAGCAAAATCAAAACCTTATTCTGTTGAGCGCGTTTGGGCAAAGGAAGCACAACTTCACTTAGCACAGGAAGAGCTGAACAAATTAAAGGCGAGGCTGAAAAATGCCAAAGCTACCAAGACGCAAGTCCTAATGGAGCTTGAAAAGACCAAAACAACTGTTATTGATCTGAAAAAAAAGCTTAAAGTTCTCAATGAATCAAGAGAATTCACAATTCATGCAACAAAAGCTTCAAAGAGTCAGGCTGTGAAACAGCTTAAAGAAGAACAGTGTGGAAATCTTAATGTAATCAATGGTGCTTCGAAAGAAGAGCTCAAAACTACTGTTCAGAGGTATAAATCTATCATTGCAGAACTTGACGTTGCAAAGCAAGAACTGAGGAAAATTCGTCAGGAGTGTAAGGAATCTTTGGAAGCAAGAGTTTCAGCTTTCAACCAAGCGGCAGAAGCTAAAGATGCAATGAACATAAATGCAAAACGAGCGTGTGAGCTTTCAAAAGAAATTTTAGCCGTACAAGAATCAATTCAGCAAATGAAGGTTGCATCTGTTGAAGCTGATCAACAGAAACAGGAGATACTAGTTGAGAAAAATGTTCCGAGGCAGTCATATAAATCTTCCCTCGAAGAATCAGAAAAGAAATTGCTCGCTTTAAAGAAACATTTTAATTCAGAACTCGTTGAAAATCTTGAAGCGAAGCTTACCGAGACAATGAGTGAAATATCAGCTATTCAGAAGGAAATTGAAAATAAAAAGATGTCGGACCTTGAACAAGTGAAAAGTGTCGCTTTGGAGCTTGATGGTGCTAAGGAAACACTGCAGAAAGTATCAGAAGAAGAAAGCTCTCTTAGAAGCTTGGTGGAAGCTCTTCGGATGGATTTGGAGTATGTAAAAAGAGACCACTCAGAATTGAAGGAAACAGAATGCGAAACTGAATCCATTGTTAAGAATATGCATGCCGAGCTTCAGAGATGTGAGTCAGAGCTTGATGTCCACTTGGCAGAAGAATCTAAAGTTAGGGGTGCATCTGAGCAAATGATCTTGACATTGAACCAGTTGTCCGATGAAACTGAAAATGCAGAGCGAGAAGCAGAAGATATGAAGATCAATGCAATCGAATTGAAGGTGGAAGCTGAAGTCACAAAACATGCATTAAAAGATGCAGAAATGAAGCTTAAACTAGCATTAGAAGAAGCAGAAGTGGCAAAAGCAGCAGAGGACCGTATTCTTGATCAGATCAGAGACTTATCTGAAAGGAATAATACTGCTCACGCTTCAACGACTGAATCCGGTGCTAGAATTACCATCTCGAGGGAGGAATATGAGTCCTTAAACCGCAGAGCTGAGGAGTGTGATAAACTAGCGAGTGCAAAAGTGGCGGCTGCGACAGCACATATTGAAGCTGCAAAGCTCAGTGAAAATGAGGCTCTCATAAAGTTAGAGGCAACTCAGATGGAAATTGAGGATATAAAGAAAGCAACGCATGAGGCCTTGAAAAAGGCCGAGATGGCTGAAAAAGCAAGGAAAATGGTGGACAGTGAGCTTAGAAGGTGGCGCGAGAGAGATCATAAGAAAGCAGCAGAAACTGTGGCTCGAGTATTGGCTGAAACACCAATGCCGTCATCATCATCGTCTTCATCACGTTTATCTCCTCGGCTTTACAAGATTCAAAAGCAGCATTCACTTCCACAAAACATGGAGGCGAGGAAGTTGGAAAAAGGGAAGAAAATTCTATTGCCTAGTATTAGTAGCTTTTTTCCTAGGAAAAAAAGCTTGCAGGTTGAGAGAGGACTTCCTTCTTACCTTCCAGGTGAGACTCCTTTGTGA 1980 0.4071 MVARIKQSVTESRKSTKSVVGEIDTNSPIQSVKDAVSLFGEAALSAGNVTIKKAKSKPYSVERVWAKEAQLHLAQEELNKLKARLKNAKATKTQVLMELEKTKTTVIDLKKKLKVLNESREFTIHATKASKSQAVKQLKEEQCGNLNVINGASKEELKTTVQRYKSIIAELDVAKQELRKIRQECKESLEARVSAFNQAAEAKDAMNINAKRACELSKEILAVQESIQQMKVASVEADQQKQEILVEKNVPRQSYKSSLEESEKKLLALKKHFNSELVENLEAKLTETMSEISAIQKEIENKKMSDLEQVKSVALELDGAKETLQKVSEEESSLRSLVEALRMDLEYVKRDHSELKETECETESIVKNMHAELQRCESELDVHLAEESKVRGASEQMILTLNQLSDETENAEREAEDMKINAIELKVEAEVTKHALKDAEMKLKLALEEAEVAKAAEDRILDQIRDLSERNNTAHASTTESGARITISREEYESLNRRAEECDKLASAKVAAATAHIEAAKLSENEALIKLEATQMEIEDIKKATHEALKKAEMAEKARKMVDSELRRWRERDHKKAAETVARVLAETPMPSSSSSSSRLSPRLYKIQKQHSLPQNMEARKLEKGKKILLPSISSFFPRKKSLQVERGLPSYLPGETPL* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3435 659 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED 5 630 - -
Mtr5g3435 659 Coils Coil 278 298 - -
Mtr5g3435 659 MobiDBLite consensus disorder prediction 587 615 - -
Mtr5g3435 659 Coils Coil 394 456 - -
Mtr5g3435 659 Pfam Weak chloroplast movement under blue light 22 575 IPR008545 -
Mtr5g3435 659 Coils Coil 223 243 - -
Mtr5g3435 659 Coils Coil 366 386 - -
Mtr5g3435 659 MobiDBLite consensus disorder prediction 8 22 - -
Mtr5g3435 659 Coils Coil 310 330 - -
Mtr5g3435 659 Coils Coil 252 272 - -
Mtr5g3435 659 Coils Coil 64 119 - -
Mtr5g3435 659 MobiDBLite consensus disorder prediction 583 615 - -
Mtr5g3435 659 Coils Coil 164 191 - -
Mtr5g3435 659 MobiDBLite consensus disorder prediction 1 22 - -
Mtr5g3435 659 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 5 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3435 Mtr-Chr5 43200224 43203139 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3435 - - cam:101515730 775.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3435 5 43200224 43203139 Mtr5g3435 5 43200224 43203139 ECH
Mtr3g1542 3 27215386 27220662 Mtr5g3435 5 43200224 43203139 PCT