Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1542 ATGGTCGCAAAAATCCGGCAAACTGCTACTGGCTCTCCCTCTCCCAGTCTAAAACCAGAGGTTGGAGAGATTGACACCAGCCCACCTTTTCAGTCCGTTAAAGATGCTGTGTCTCTATTTGGTGAAGGTGCTTTCTCTGGGGAAAGACCTATCCATAAGAAACCAAAAGCTTATTCTGCCGAGAGAGTTTTGGCCAAGGAGACGCAACTTCATGTAGCCGAAAAAGAGCTGAACAAGTTAAAGGAACAAGTAAAGAATGCTGAAACTACTAAGGCTCAAGCTCTTGTGGAGCTTGAAAGGGCCCAAAGGACAGTTGATGATTTGACACAGAAGCTAAAACTTATTACTGAATCTAGGGAGTCAGCAGTGAAGGCAACAGAAGCTGCAAAAAGTCAGGCAAAGCAAAAGTACGGCGAGTCTGATGGAGTAAACGGTGCCTGGAAAGAAGAGTTAGAAAATGCAGTTCAAAGGTATGCATCTATCATGACAGAACTTGATGCTGCTAAGCAAGATCTGAGAAAAACTCGTCAGGAATACGATTCATCCTCGGATGCTAGAGTGTCAGCTGTCAAGAGAACAGAAGAAGCTGAAAATGCAATGAAGGAAAACACAGAAAGAGTATCTGAGCTGTCAAAAGAAATTTCAGCTGTAAAGGAGTCAATTGAGCAAACAAAGCTAGCATATGTGGAATCGCAGCAACAGCAAGCATTGGTATTAACTGAAAAAGATGCTCTTAGACAATCCTACAAAGCTACCCTTGAACAATCCAAAAAGAAATTACTTGCTTTGAAAAAGGAATTTAATCCCGAAATCACAAAAAGTCTTGAAGCACAGTTGGCCGAGACAATGAATGAAATTGCGGCTCTGCATACAGAACTGGAAAACAAAAGATCGTCTGACTTGGACTCTGTGAAAACTGTTACTTCGGAGCTTGATGGTGCGAAAGAATCACTGCAGAAAGTAGTAGATGAAGAAAACACTCTTCGAAGCTTGGTAGAGACTCTGAAGGTGGAACTAGAGAATGTAAAGAAAGAACATTCTGAATTGAAGGAAAAAGAGTCCGAATTGGAATCCACAGTTGGGAATCTGCATGTCAAACTCCGCAAAAGTAAGTCTGAGCTTGAAGCCTGTTCGGCCGATGAATCTAAGGTTAGAGGTGCATCTGAGGAAATGATCTTGACGCTGAGTCGGTTAACATCCGAAACTGAAGAAGCACGGCGGGAAGTAGAAGATATGAAGAACAAGACAGACGAGTTAAAGAAAGAAGCCGAAGCTACCAAGCTTGCATTAGAAGAAGCAGAGAAAAAACTGAAAGAGGCAACGGAAGAAGCAGAAGCAGCAAAAGCAGCTGAAGCTAGTGCAATCGAGCAGATTACAGTGCTAACCGAAAGGACTAGCGCAAGACGTGCATCTACATCGTCAGAATCTGGTGCTGCAATGACAATATCGACGGAGGAGTTCGAGTCGCTAAAACGGAAAGTCGAGGAATCCGATAAATTAGCTGACATGAAAGTGGATGCTGCCAAAGCACAGGTAGAAGCTGTGAAGGCTAGCGAAAACGAGGTTTTGAAAAAGTTGGAGGCAACTCAGAAGGAGATTGAAGATATGAAAACTGCAACACAGGAGGCCTTGAAAAAGGCCGAGATGGCCGAAGCAGCAAAGAGGGCAGTTGAGGGTGAGCTTCGAAGGTGGCGGGAGCGAGAACAGAAAAAAGCGGCAGAAGCTGCAGCTCGGATACTAGCCGAAACACAGATGTCATCGCAATCATCTCCTCAGCATTATAGGATTCAAAAGCAGAATGTTCCACCTCCTCGTACAACACTGGAAGTGAAGAAGTTAGATAAAGAGAAGATTTCGGTTTCGAAGAAAATCAACATTAGTGGTATCTTTCAGAGGAAGAAAAGTAATATTGTTGAGGATGGATCTGCTTCTTATTTGCCTGGTGAGAATCCTGTATAG 1959 0.4349 MVAKIRQTATGSPSPSLKPEVGEIDTSPPFQSVKDAVSLFGEGAFSGERPIHKKPKAYSAERVLAKETQLHVAEKELNKLKEQVKNAETTKAQALVELERAQRTVDDLTQKLKLITESRESAVKATEAAKSQAKQKYGESDGVNGAWKEELENAVQRYASIMTELDAAKQDLRKTRQEYDSSSDARVSAVKRTEEAENAMKENTERVSELSKEISAVKESIEQTKLAYVESQQQQALVLTEKDALRQSYKATLEQSKKKLLALKKEFNPEITKSLEAQLAETMNEIAALHTELENKRSSDLDSVKTVTSELDGAKESLQKVVDEENTLRSLVETLKVELENVKKEHSELKEKESELESTVGNLHVKLRKSKSELEACSADESKVRGASEEMILTLSRLTSETEEARREVEDMKNKTDELKKEAEATKLALEEAEKKLKEATEEAEAAKAAEASAIEQITVLTERTSARRASTSSESGAAMTISTEEFESLKRKVEESDKLADMKVDAAKAQVEAVKASENEVLKKLEATQKEIEDMKTATQEALKKAEMAEAAKRAVEGELRRWREREQKKAAEAAARILAETQMSSQSSPQHYRIQKQNVPPPRTTLEVKKLDKEKISVSKKINISGIFQRKKSNIVEDGSASYLPGENPV* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1542 652 Coils Coil 246 266 - -
Mtr3g1542 652 Gene3D - 269 390 - -
Mtr3g1542 652 Coils Coil 395 457 - -
Mtr3g1542 652 Coils Coil 325 359 - -
Mtr3g1542 652 Coils Coil 509 567 - -
Mtr3g1542 652 MobiDBLite consensus disorder prediction 583 604 - -
Mtr3g1542 652 Coils Coil 193 227 - -
Mtr3g1542 652 MobiDBLite consensus disorder prediction 174 207 - -
Mtr3g1542 652 MobiDBLite consensus disorder prediction 583 605 - -
Mtr3g1542 652 Coils Coil 63 118 - -
Mtr3g1542 652 Coils Coil 148 185 - -
Mtr3g1542 652 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 4 624 - -
Mtr3g1542 652 Coils Coil 272 299 - -
Mtr3g1542 652 MobiDBLite consensus disorder prediction 1 29 - -
Mtr3g1542 652 Pfam Weak chloroplast movement under blue light 23 570 IPR008545 -
Mtr3g1542 652 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED 4 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1542 Mtr-Chr3 27215386 27220662 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1542 - - gmx:100794569 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1542 3 27215386 27220662 Mtr5g3435 5 43200224 43203139 PCT