Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3403 ATGAAGAGAGGACGATTACTCAATTTCTTTGTCAATCCAACACCAAAAAAATGGTCACTTCTTTCTCTTAGCCACCTTAAATCTCAATCTCATCACTTCATGTCTGTTTCTTCTCCTGTTGATACTAATTCAAAGAATCTTTTACCTCATGATGATCATTCATGTGAAAAATTCTTCACACCAAGTTCCAGATATGGGATCAACACCTTGCATACAAGTTCAGTTGTGGAACAATCCGAAAAGGTTGAGGATGAAAATTATGTGTGGATGAAGATGCAGGAAGAAGCTAAAGTTGATGTCATTGTTGAACCAATTTTGTCTAGTTACTATTATGTTTCAATCTTGTCACAAAAAACATTGGAAACTGCTTTGGCTAATCACCTTGCTGTTAAATTAAGCAGTGTAAGTCTTCCTAGTACAACACTTTCTGATCTTTTTGTTAGAATTTTGGAATCTGATAAAGAAATTATGTATGCTATGAAAAATGATCTAAAAGCAGTTAATGAAAGAGACCCTGCTTGTATAAGTCATGTTCATTGTTTCTTGAATTTCAAAGGATTTTTAGCATGTCAAGCTCATAGGGTAGCTCATAATTTGTGGTCAAATGGAAGGAAGATTTTGGCTGTTATGATTCAGAATCGCGTTTCGGAAGTTTTTGGAGTTGATATTCATCCTGGAGCTAAGATTGGAAGTGGGATTTTGCTTGATCATGCAACTGGGATTGTGGTTGGTGAAACTGCTGTTATTGGAAATGATGTGTCCATTTTGCACGGTGTGACGTTGGGAGGGACCGGTAAGGCTCATGGCGATAGGCATCCAAAGATTGGTGACGGGGTGCTTATAGGCGCTGGAACTTGTATTTTGGGGAATATTAAGATTGGTGATGGTGCTAAAATTGGTGCCGGTTCAGTTGTGATCAAGGAAGTTCCTCCAAGGACTACGGTGGTTGGGAATCCGGCAAAATTGATTGGAGGGAAGAATAATCCTATTAAACTTGATAAGATTCCTAGCCACACTATGGACCATGTTGCACATATTTCTGAGTTTTATGATTATGTTATCTAG 1065 0.3793 MKRGRLLNFFVNPTPKKWSLLSLSHLKSQSHHFMSVSSPVDTNSKNLLPHDDHSCEKFFTPSSRYGINTLHTSSVVEQSEKVEDENYVWMKMQEEAKVDVIVEPILSSYYYVSILSQKTLETALANHLAVKLSSVSLPSTTLSDLFVRILESDKEIMYAMKNDLKAVNERDPACISHVHCFLNFKGFLACQAHRVAHNLWSNGRKILAVMIQNRVSEVFGVDIHPGAKIGSGILLDHATGIVVGETAVIGNDVSILHGVTLGGTGKAHGDRHPKIGDGVLIGAGTCILGNIKIGDGAKIGAGSVVIKEVPPRTTVVGNPAKLIGGKNNPIKLDKIPSHTMDHVAHISEFYDYVI* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3403 354 TIGRFAM cysE: serine O-acetyltransferase 160 321 IPR005881 GO:0005737|GO:0006535|GO:0009001
Mtr5g3403 354 Gene3D Hexapeptide repeat proteins 222 343 - -
Mtr5g3403 354 SUPERFAMILY Trimeric LpxA-like enzymes 84 324 IPR011004 -
Mtr5g3403 354 Pfam Bacterial transferase hexapeptide (six repeats) 272 306 IPR001451 -
Mtr5g3403 354 Gene3D serine acetyltransferase, domain 1 71 221 IPR042122 -
Mtr5g3403 354 CDD LbH_SAT 219 319 IPR045304 -
Mtr5g3403 354 PANTHER SERINE ACETYLTRANSFERASE 1, CHLOROPLASTIC 63 354 - -
Mtr5g3403 354 SMART SATase_N_2_a 88 192 IPR010493 GO:0005737|GO:0006535|GO:0009001
Mtr5g3403 354 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 281 309 IPR018357 GO:0016740
Mtr5g3403 354 Pfam Serine acetyltransferase, N-terminal 88 192 IPR010493 GO:0005737|GO:0006535|GO:0009001
Mtr5g3403 354 PANTHER SERINE ACETYLTRANSFERASE 63 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3403 Mtr-Chr5 42921219 42922683 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3403 88 353 Miscellaneous Gene Families AT2G17640 54.135 6.88e-91 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3403 K00640 - gmx:100820316 457.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3403 5 42921219 42922683 Mtr5g3403 5 42921219 42922683 ECH
Mtr3g1479 3 26371602 26373236 Mtr5g3403 5 42921219 42922683 PCT