Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1479 ATGATTGTTCTTGTTCTAGGTCGCTCCTTCACTTCCTCATTATATAAGAAGACTTCCCCTTTCACACAAAATCCATTCAAACCCATTTTTCTTCTTCCCCCAAAGTTTCAATCTTTATTCCCATTTTACCCTTTTCCTTCTTCTATCATGGCTACTTGTATTGACTCTTCTACCCCTCCTCCTTCTCGCAAACCAAACATTCCTCATCAACATGATGACCCTTCATTCAATTTTGTCAAATTTTACCGACCCTTTTCACATAATCATGAAAAAAACTTGCATACACAAAGGATTGTTGAAGATTTTGAACATGTTCATCTTCATGATAAGGTTGAAAATGGTGTTGAGGTTGATTTGTGGTTGAAGATTCAAGAAGAAGCAAGGTTAGATTTAGAACAAGAACCAATTTTATCTAGCTATTATTTCAGCTCAATATTATCACACAAATCATTAGAAAGTGCTTTATCAAATCAACTCTCAATTCATTTGAGTAATTTGAGTCTTTCTAGCACAACCCTTTTTGATCTTTTCATGAATATTTTAGTTGATGATCAAGATATTATAGATGCTATGAAAGATGATATGAAAGCAGTGAAAGAAAGAGACCCTGCTTGTATAAGCTATGTTCATTGTTTGTTGAATTTCAAAGGCTTTTTAGCTTGTCAAGCTCATAGGGTAGCACACAAATTATGGTTACAAGGAAGAAAAGTGTTAGCACTTTTGATTCAAAATAGGGTTTCTGAGGTTTTTGCAGTTGATATTCATCCTGGTGCTAAGATTGGTAGAGGGATTTTGTTGGATCATGCAACAGGTCTTGTTGTTGGTGAAACTGCTGTGGTTGGAAATAATGTTGCAATTTTGCATAATGTTACATTAGGTGGAACTGGTAAAGTTTGTGGTGATAGACATCCTAAGATTGGTGATGGTGTTTTGATTGGTGCTGGAACATGTATTTTAGGGAATATTAAGATTGGTGATGGTGCTAAGATTGGTGCTGGTTCTGTTGTGTTGAAGGATGTTCCACCAAGAACTACTGCTGTTGGAAATCCAGCTAAGTTGATTGGTGGAAAAGATAATCCTATCATGTTGGATAAGATTCCTAGCTCTACTATGGACCATACTTCATATATTTCTGAGTGGTCTGATTATGTTATTTAG 1158 0.3549 MIVLVLGRSFTSSLYKKTSPFTQNPFKPIFLLPPKFQSLFPFYPFPSSIMATCIDSSTPPPSRKPNIPHQHDDPSFNFVKFYRPFSHNHEKNLHTQRIVEDFEHVHLHDKVENGVEVDLWLKIQEEARLDLEQEPILSSYYFSSILSHKSLESALSNQLSIHLSNLSLSSTTLFDLFMNILVDDQDIIDAMKDDMKAVKERDPACISYVHCLLNFKGFLACQAHRVAHKLWLQGRKVLALLIQNRVSEVFAVDIHPGAKIGRGILLDHATGLVVGETAVVGNNVAILHNVTLGGTGKVCGDRHPKIGDGVLIGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPAKLIGGKDNPIMLDKIPSSTMDHTSYISEWSDYVI* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1479 385 SUPERFAMILY Trimeric LpxA-like enzymes 119 355 IPR011004 -
Mtr3g1479 385 Gene3D serine acetyltransferase, domain 1 105 252 IPR042122 -
Mtr3g1479 385 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 312 340 IPR018357 GO:0016740
Mtr3g1479 385 SMART SATase_N_2_a 119 223 IPR010493 GO:0005737|GO:0006535|GO:0009001
Mtr3g1479 385 Pfam Serine acetyltransferase, N-terminal 119 223 IPR010493 GO:0005737|GO:0006535|GO:0009001
Mtr3g1479 385 Gene3D Hexapeptide repeat proteins 253 370 - -
Mtr3g1479 385 PANTHER SERINE ACETYLTRANSFERASE 50 385 - -
Mtr3g1479 385 PANTHER SERINE ACETYLTRANSFERASE 50 385 - -
Mtr3g1479 385 TIGRFAM cysE: serine O-acetyltransferase 191 352 IPR005881 GO:0005737|GO:0006535|GO:0009001
Mtr3g1479 385 Pfam Bacterial transferase hexapeptide (six repeats) 303 337 IPR001451 -
Mtr3g1479 385 CDD LbH_SAT 250 350 IPR045304 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1479 Mtr-Chr3 26371602 26373236 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1479 119 375 Miscellaneous Gene Families AT2G17640 55.253 1.58e-91 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1479 K00640 - gmx:100779106 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1479 3 26371602 26373236 Mtr5g3403 5 42921219 42922683 PCT