Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3269 ATGGAACTCAAATTCATTCTTCTTCTTATTATTAATCTAATAATGCTTCTCTCTTCGACCGTCACTGCTGATCAATATGTTCGCCCTTTGCCAAGAAAAAACTTAAACATTCCATGGCCATGGGATTCTAAATCCCAACCTTACCCTCAACAGGTACATATATCTTTGGCAGGAGACAGACACATGAGAATTACATGGATAACTGATGACAAACACTCACCTTCATTTGTAGAATATGGAACATTACCTGGTAGATATGATTCAATATCTGAAGGAGAGTTCACCTCTTATAATTATATGTTATATAGCTCAGGAAAGATACACCATACTGTAATTGGACCTTTGGAATATAATACCATGTATTTTTATCGATGCGGCGGACAAGGTCCCGAGTTCAAGCTCAAAACTCCTCCATCTAAATTTCCAATTACTTTTGCTGTGGCCGGCGATCTTGGTCAAACTGGTTGGACTAAATCAACATTGGATCACATTGATCAATGTAAATATGATGTTTACCTTCTTCCGGGTGATCTTTCATATGCTGATTGTATGCAGCATCTTTGGGACTCGTTTGGTAGGCTTGTGGAGCCGCTTGCTAGTGCGAGGCCGTGGATGGTAACAGAAGGAAATCATGAAGAGGAAAATATACCATTGTTAACCGATGAATTTGTATCGTATAATTCTAGATGGAAAATGCCGTTTGAGGAAAGTGGATCAACTTCAAATCTCTATTATTCATTTGAAGTTGCAGGTGTTCATGTTATCATGCTAGGGTCTTATGCAGATTATGATAAGTACTCGGAGCAATACAGATGGCTAAAGGAAGATCTGTCCAAGGTGGACAGGAAAAGGACACCTTGGCTGGTTGTGTTATTTCACGTGCCGTGGTATAATAGTAACAAGGCTCACCAAGGTGCAGGGGATGATATGATGACAGTCATGGAGCCATTGCTGTATGCTGCCAGTGTTGATTTAGTTCTTGCTGGACATGTTCATGCTTATGAACGTTCGAAACGTGTGTATAATGGAAGATTGGATCCTTGTGGCGCTGTCCATATAACTATTGGTGATGGTGGAAACCGAGAAGGCTTAGCTCATAGGTACATAAATCCACAACCAAAGTGGTCAGAATTTCGTGAAGCCAGTTTTGGTCATGGTGAGCTGAAAATTGTAAACTCAACTCATGCCTTCTGGAGTTGGCATAGGAATGATAATGATGAGTCAATTAAGGCCGATGGTATCTGGATAACCTCTTTGATAAGCTCAGGATGCGTTGATAAGAACAAACATGAGCTCAGGAGCATGCTTATGACACCCTAA 1320 0.4053 MELKFILLLIINLIMLLSSTVTADQYVRPLPRKNLNIPWPWDSKSQPYPQQVHISLAGDRHMRITWITDDKHSPSFVEYGTLPGRYDSISEGEFTSYNYMLYSSGKIHHTVIGPLEYNTMYFYRCGGQGPEFKLKTPPSKFPITFAVAGDLGQTGWTKSTLDHIDQCKYDVYLLPGDLSYADCMQHLWDSFGRLVEPLASARPWMVTEGNHEEENIPLLTDEFVSYNSRWKMPFEESGSTSNLYYSFEVAGVHVIMLGSYADYDKYSEQYRWLKEDLSKVDRKRTPWLVVLFHVPWYNSNKAHQGAGDDMMTVMEPLLYAASVDLVLAGHVHAYERSKRVYNGRLDPCGAVHITIGDGGNREGLAHRYINPQPKWSEFREASFGHGELKIVNSTHAFWSWHRNDNDESIKADGIWITSLISSGCVDKNKHELRSMLMTP* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3269 439 SUPERFAMILY Purple acid phosphatase, N-terminal domain 36 138 IPR008963 GO:0003993|GO:0046872
Mtr5g3269 439 CDD MPP_PAPs 142 418 IPR041792 -
Mtr5g3269 439 Pfam Purple acid Phosphatase, N-terminal domain 49 129 IPR015914 GO:0003993|GO:0046872
Mtr5g3269 439 Gene3D - 140 426 IPR029052 -
Mtr5g3269 439 Pfam Iron/zinc purple acid phosphatase-like protein C 350 407 IPR025733 -
Mtr5g3269 439 PANTHER PURPLE ACID PHOSPHATASE 4 429 - -
Mtr5g3269 439 Pfam Calcineurin-like phosphoesterase 144 334 IPR004843 GO:0016787
Mtr5g3269 439 PANTHER ACID PHOSPHATASE RELATED 4 429 IPR039331 GO:0003993
Mtr5g3269 439 Gene3D - 48 139 - -
Mtr5g3269 439 SUPERFAMILY Metallo-dependent phosphatases 142 406 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3269 Mtr-Chr5 41523319 41526440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3269 49 429 Miscellaneous Gene Families AT2G03450 26.593 4.10e-30 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3269 K22390 - gmx:100787977 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3269 5 41523319 41526440 Mtr5g3269 5 41523319 41526440 ECH
Mtr3g1270 3 23437763 23440990 Mtr5g3269 5 41523319 41526440 PCT