Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1270 ATGAAACTAAAACTGATTCCAACAGTTTTACTGATCCTGTCAGTAACTTCAACTGCTGATGACTATGTTAGACCTCAGCCTAGAAAAACCTTACATCTTCCATGGCATTCTAAACCCTCTTCTTATCCTCAACAGGTACACATTTCATTGGCAGGAGACAAGCATATGAGGGTTACCTGGATTACTGACGACAAATCTGCACCTTCAGTTGTTGAATACGGAACATTGCCAGGGAAGTATGACAATGTAGCTGAAGGAGAGACAACCTCTTACAGTTACATTTTCTACAGCTCAGGAAAGATACACCATACGGTAATAGGTCCTTTAGAGCCGAACTCTGTTTACTTTTACCGATGCGGTGGACTAGGTCCGGAGTTCGAGCTCAAAACACCACCAGCTCAATTTCCAATTAGTTTTGCTGTGGTTGGAGATCTTGGCCAAACTGGTTGGACCAAATCAACGTTAGATCACATCGACCAATGCAAGTACGATGTTAACCTGATTCCTGGCGACCTTTCGTATGCTGATTATATCCAGCATCGTTGGGACACGTTTGGTAGACTTGTGCAGCCACTTGCTAGTTCTAGACCATGGATGGTAACACAAGGGAATCATGAAGTAGAGCATATACCTTTGTTAAAGGATGGATTTATATCCTATAATTCGAGATGGAAAATGCCGTTTGAGGAAAGTGGATCAAGCTCGAACCTCTATTATTCTTTTGAAGTTGCCGGTGCTCACATTATCATGCTTGGTTCATATGATGATTATGATGTGTACTCAGAACAATATAAATGGCTAAAGACAGATCTGTCAAAGGTGGACAGGAAAAGGACACCTTGGTTGCTTGTCATATTTCATGTCCCATGGTATAATAGTAACACAGCTCATCAAGGTGAAGGTGGTGATATGATGGAAACCATGGAGCCATTGCTTTATGCTGCTAGCGTAGATTTAGTTTTTGCTGGTCATGTCCACGCATATGAACGCTCGAAACGTGTATATAATGGAAAATTGGATCCTTGTGGTGCTGTTCATATAACAATCGGTGATGGAGGGAACAAAGAAGGCTTAGCTCATAAGTATATAGATCCACAGCCGAAGTGGTCAGAGTTCCGTGAGGCCAGTTTCGGTCATGGTGAGTTAAAGATTGTAAATTCAACGCATGCCTTCTGGAGTTGGCACCGGAATGACGATGACGAGCCGGTAAAATCTGATGATATCTGGATAACCTCTTTAGTTAACTCAGGATGTGTTGCTCAGAAGAAAACTGAACTTGAGCATGCACTTATGACACCCTAA 1302 0.4224 MKLKLIPTVLLILSVTSTADDYVRPQPRKTLHLPWHSKPSSYPQQVHISLAGDKHMRVTWITDDKSAPSVVEYGTLPGKYDNVAEGETTSYSYIFYSSGKIHHTVIGPLEPNSVYFYRCGGLGPEFELKTPPAQFPISFAVVGDLGQTGWTKSTLDHIDQCKYDVNLIPGDLSYADYIQHRWDTFGRLVQPLASSRPWMVTQGNHEVEHIPLLKDGFISYNSRWKMPFEESGSSSNLYYSFEVAGAHIIMLGSYDDYDVYSEQYKWLKTDLSKVDRKRTPWLLVIFHVPWYNSNTAHQGEGGDMMETMEPLLYAASVDLVFAGHVHAYERSKRVYNGKLDPCGAVHITIGDGGNKEGLAHKYIDPQPKWSEFREASFGHGELKIVNSTHAFWSWHRNDDDEPVKSDDIWITSLVNSGCVAQKKTELEHALMTP* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1270 433 SUPERFAMILY Metallo-dependent phosphatases 136 403 IPR029052 -
Mtr3g1270 433 Gene3D - 42 133 - -
Mtr3g1270 433 CDD MPP_PAPs 134 412 IPR041792 -
Mtr3g1270 433 Pfam Purple acid Phosphatase, N-terminal domain 43 121 IPR015914 GO:0003993|GO:0046872
Mtr3g1270 433 Gene3D - 134 419 IPR029052 -
Mtr3g1270 433 PANTHER PURPLE ACID PHOSPHATASE 18 7 424 - -
Mtr3g1270 433 SUPERFAMILY Purple acid phosphatase, N-terminal domain 30 132 IPR008963 GO:0003993|GO:0046872
Mtr3g1270 433 Pfam Iron/zinc purple acid phosphatase-like protein C 344 400 IPR025733 -
Mtr3g1270 433 Pfam Calcineurin-like phosphoesterase 138 328 IPR004843 GO:0016787
Mtr3g1270 433 PANTHER ACID PHOSPHATASE RELATED 7 424 IPR039331 GO:0003993
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1270 Mtr-Chr3 23437763 23440990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1270 43 417 Miscellaneous Gene Families AT2G03450 26.049 2.49e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1270 K22390 - gmx:100782338 790.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1270 3 23437763 23440990 Mtr5g3269 5 41523319 41526440 PCT