Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2889 ATGGAGAAGAAGCTGATGATGATGATGGAAGATTCATTGGAAAAACAAGAAGAGATGGAAAATGGAATAAGAAGAGTGAGTTCAAGAGCTGAAGTTGATACGTCAATGCCATTTGAGTCTGTTAAGGAAGCTGTTACTCGTTTTGGTGGAAGTGGTCCTTGGTTACCTCTTTACAAGCTTGGTGAAGCTTATCAGAACAGTATTGAAGACTTTGACATAAAGAAAATAGAGGAACAAGCAGCAAAGTTGGAAAAGGATTTGATTATGAAAGAACTCGAAACACTTGATGTGCTTGAAGAACTCGGATCTGCCAAAACAATTCTCGAGAAATTAAAGCAGCAGCTACAATCTGAAGCATTGAAATGTGCTTCAACTCAATCGTGCGAAAATATTGGAGCTCTTGTTAAAAATTCTGAAAAGATTGTCCACCGTCAAGAGAAAATATTGCAAATTTCAAGTCCATGCCATACTTCATCGCCCAATATGTTGCTAACCGAGTTAAAAGAAGCGAAGATGAACCTTGGTAAAACTATAAACGATCTTGGGACAATACAATCTTCTGTCGAAACTTTGAATAAGAAGATGAAGAAGGAGAGACTTTTTCTCGAGAGGACACGGGAGAATCTGCAATCAAAGTTTGCAGCTATCTCTGCTCAAAATGTGGCCAAAAAAGAAGCAATTACAAAGCCACCAGAAGCTCCTGTAGAAAAGGATTTTACTTTTGACACCCCCCAAAAGGTTGTGAAGGATTACCAATTGGATGTTGAACAGTTCAATGGAATGGTTGGAACAAGATCTGCAGAAGTTTCGAAGCAAGGGATTGAGTATGAAGAGAATGAGTTTAATATTAAGACTGCTGAGATGAGGTGGTTTGCAGCTAAAAAGATGGAAGAAGCTGCAATGGCAGCCGAAGCCGTTGCTCTAGCTGAAATCAAGGCTCTATCTGGTTGTGCTGATATATCATCGCGATTTTCTATGCGAGAACATCAGAAAGTGACTTCTGCATTAGAGGTATACTCTACTCTAAACCCCGAATTTCAAATACCTGAAGAGTCTATCTTGAAGAAGGTAATACATGCCAATTTCAAAATGGATGAAGTAAATGCTTCTAAACACAATATTCTTAAAAAATTGGAGGAAGCAACCGAAGAAGTTCTACGCAGCAAAGAAATTTTAACTGAAGCTTTAAACGGTATTGAAACTGCAAACAGAAAGCAACGTGCTGCTGAAGAGGCTCTAAGGAGATGGATTCCTGAAAACTATCTAAAGGGCCGAGCTATGCATAACTCGATTAAGCGAAACAAGTTCAATCAAGTTGAAAAGTGTCAAACTATGAAGCCCGCTGTAAGATCCTCGGTTTCAATGAGAGATCTACTTAGTAGAAAGCAGGTTCCTGACGAATATACTACGACAAAGGAGATGGAAGAGCATGCTGAAACAAAGGTAGCATTGAGTCAAATGCTTCGAGCAATGAGGGAAAATCAAACTCTTCCAACTGAACATGAGAATGACGGGGGCGACCAAAAGCAGTCCATAGCACATCAGAAGAAGAAGGTTGGATTCATTCGAATATCATTCCCCTTTGGAAAGCGAAATGATAAAAAGACATGA 1611 0.3935 MEKKLMMMMEDSLEKQEEMENGIRRVSSRAEVDTSMPFESVKEAVTRFGGSGPWLPLYKLGEAYQNSIEDFDIKKIEEQAAKLEKDLIMKELETLDVLEELGSAKTILEKLKQQLQSEALKCASTQSCENIGALVKNSEKIVHRQEKILQISSPCHTSSPNMLLTELKEAKMNLGKTINDLGTIQSSVETLNKKMKKERLFLERTRENLQSKFAAISAQNVAKKEAITKPPEAPVEKDFTFDTPQKVVKDYQLDVEQFNGMVGTRSAEVSKQGIEYEENEFNIKTAEMRWFAAKKMEEAAMAAEAVALAEIKALSGCADISSRFSMREHQKVTSALEVYSTLNPEFQIPEESILKKVIHANFKMDEVNASKHNILKKLEEATEEVLRSKEILTEALNGIETANRKQRAAEEALRRWIPENYLKGRAMHNSIKRNKFNQVEKCQTMKPAVRSSVSMRDLLSRKQVPDEYTTTKEMEEHAETKVALSQMLRAMRENQTLPTEHENDGGDQKQSIAHQKKKVGFIRISFPFGKRNDKKT* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2889 536 Coils Coil 73 93 - -
Mtr5g2889 536 Coils Coil 192 212 - -
Mtr5g2889 536 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 15 535 - -
Mtr5g2889 536 Coils Coil 98 118 - -
Mtr5g2889 536 Coils Coil 474 494 - -
Mtr5g2889 536 MobiDBLite consensus disorder prediction 496 517 - -
Mtr5g2889 536 Pfam Weak chloroplast movement under blue light 165 419 IPR008545 -
Mtr5g2889 536 Pfam Weak chloroplast movement under blue light 30 117 IPR008545 -
Mtr5g2889 536 Coils Coil 364 395 - -
Mtr5g2889 536 MobiDBLite consensus disorder prediction 496 514 - -
Mtr5g2889 536 PANTHER WEB FAMILY PLANT PROTEIN 15 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2889 Mtr-Chr5 37446584 37449888 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2889 - - cam:101496164 723.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2237 3 35993704 35997161 Mtr5g2889 5 37446584 37449888 ECH
Mtr5g2889 5 37446584 37449888 Mtr5g2889 5 37446584 37449888 ECH
Mtr3g2237 3 35993704 35997161 Mtr5g2889 5 37446584 37449888 PCT