Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2237 ATGGAAATGGCGGAAACTCGCGTTGCCGGCGCCGATACGGAGAGCGGAATTAGGAAGGTCAATTATCGAGCTGAGATTGATACATCGCCGCCGTTCGAATCGGTTAAGGAAGCCGTCACTCGTTTCGGTGGAAGTGGACCTTGGATTCCTCTTTACAGGCTTGGAGAAGCTTTTAACAACTTTGACGATTTTGATATAAAGAAAGTGGAAGAACAAGCAGCAGAGTTGGAAAAGGATTTGATTGTCAAAGAACTTGAAACACTTGACGTGCTCGAAGAACTAGGTGCAACCAAAAGGATTGTGGAGGACTTAAAGCAACAGCTACAAAAAGAAGCATTGAAATTATCTGCTACTCCAGATTTAAATTCTAATGAACAGGTTGGAACTCCTGTTATTAAGGAGATGAATAAAGAAACTAATGGGAATAATGTCAACAACAATCAAGAACAGACATCGCATATTCCAAGTTCATGCTCTATGTCATCACCTGATATGATTTTAATGGACTTGAAACAAGCCAAAGTGAATCTTGGTAATACTATGAATGAACTTGAGGCGATACAATCGTCTGTTGAATCTTTAAATGAAAAGATGAAGAAGGAGAAAGTTTTTCTGGAGAAGACACGTGAAAAGCTAGCATCAAAGTTTGCAGCTGTGTCTGCTCAAGAGAAGGAACAAGAGCAAGCAAGATTGAATTCACCATCATCTAATGTGGAATTCACTTTTGATAATCATGCAAATATGAGGAATTTCAATTTTGATTCTGAGCAGCACAATAGAATGGTTGAGACAAGATCTGAAGTTTCAAAGCCCTTATCTGTGTATCAAGAGCAAGCAAGATTGAGTCCACCATCATCTCATGTTGAATTCACCTTTGATAATCCTGCAAATACGAGGAATTTCAATTGGGATTATGAGCAGCACAATAGAATAGTTGAGACAAGAAGATCTGAAGTTTCAAATCCCTTATATGTGTATGACGAGCACAGTTTTAGTGTTAAGACCGCCGAGATGAGGTGGCTTGCAGCCAAAAAGATGGAAGAAGCTGCAAAGGCAGCAGAAGCTATTGCTCTTGCTGAAATCAAGGCTCTATCTGGCGCCGAGAGATCATTTGAATTCGCTCGGCCTGAACCTCGGAAAGTCACTTTTGCTTTAGCAGAAAACTCTCCTCTAAACCCCAAGGCTATGATGATGCCTGAGGATTCAACCCCGAAGAAGGTAATAGATTCGAAGTTTCAAATTGATGAAACAAATATTTCTAAGCTGACTATTTTGAAAAGGCTGGAGGAGGCATCCGAAGAAATTTTAACAAGCAAACAAGTCTTATCTGATGCTTTAAACAGAATTGAATCTGCAAATAGAAAACAACATGCTGCTAGGGAAGCTCTGCGGATATGGATACCGGAGGTTGATCTAAGGGAGAAAGCAGTGTATAACTCTTTTAACTTTGACAAGTTTAATCAAGCTAGAGTTCGTCGAGATTCTTCTTTACCGGATGTAACCAGGTCAACAACAGGAAAAAATAATCAAAAGCCTGTTTCGAGGCCAACAACTTCAATGAGAGATGTACTTAGCAGAAAGCAAGTTCCTGAAGGATATGCTGCAAGAAAGGAGATGGAAGAGCATACTGAAAGGCGAAAGGTAGCATTGAGCCAAATGCTTCGAGCACTGAGGGAAGATCTAACCCTTTCACCAAAAGCTGAGAAAGACCATGAGAGCGATCAAAAGCAGCCTGTGGCACCGAGGAAGAAGTTTGGCTTCATCCATATATCACTCCCTATGACTAGGCCAAGTAAGAAAAGGACATGA 1809 0.4074 MEMAETRVAGADTESGIRKVNYRAEIDTSPPFESVKEAVTRFGGSGPWIPLYRLGEAFNNFDDFDIKKVEEQAAELEKDLIVKELETLDVLEELGATKRIVEDLKQQLQKEALKLSATPDLNSNEQVGTPVIKEMNKETNGNNVNNNQEQTSHIPSSCSMSSPDMILMDLKQAKVNLGNTMNELEAIQSSVESLNEKMKKEKVFLEKTREKLASKFAAVSAQEKEQEQARLNSPSSNVEFTFDNHANMRNFNFDSEQHNRMVETRSEVSKPLSVYQEQARLSPPSSHVEFTFDNPANTRNFNWDYEQHNRIVETRRSEVSNPLYVYDEHSFSVKTAEMRWLAAKKMEEAAKAAEAIALAEIKALSGAERSFEFARPEPRKVTFALAENSPLNPKAMMMPEDSTPKKVIDSKFQIDETNISKLTILKRLEEASEEILTSKQVLSDALNRIESANRKQHAAREALRIWIPEVDLREKAVYNSFNFDKFNQARVRRDSSLPDVTRSTTGKNNQKPVSRPTTSMRDVLSRKQVPEGYAARKEMEEHTERRKVALSQMLRALREDLTLSPKAEKDHESDQKQPVAPRKKFGFIHISLPMTRPSKKRT* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2237 602 Coils Coil 91 111 - -
Mtr3g2237 602 Coils Coil 167 215 - -
Mtr3g2237 602 MobiDBLite consensus disorder prediction 531 545 - -
Mtr3g2237 602 MobiDBLite consensus disorder prediction 498 524 - -
Mtr3g2237 602 PANTHER WEB FAMILY PLANT PROTEIN 277 601 - -
Mtr3g2237 602 PANTHER WEB FAMILY PLANT PROTEIN 11 278 - -
Mtr3g2237 602 Coils Coil 66 86 - -
Mtr3g2237 602 MobiDBLite consensus disorder prediction 560 602 - -
Mtr3g2237 602 MobiDBLite consensus disorder prediction 561 579 - -
Mtr3g2237 602 MobiDBLite consensus disorder prediction 494 545 - -
Mtr3g2237 602 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 11 278 - -
Mtr3g2237 602 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 277 601 - -
Mtr3g2237 602 Coils Coil 428 462 - -
Mtr3g2237 602 Pfam Weak chloroplast movement under blue light 24 110 IPR008545 -
Mtr3g2237 602 Pfam Weak chloroplast movement under blue light 332 468 IPR008545 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2237 Mtr-Chr3 35993704 35997161 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2237 - - mtr:MTR_3g072350 1052.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2237 3 35993704 35997161 Mtr5g2889 5 37446584 37449888 ECH
Mtr3g2237 3 35993704 35997161 Mtr3g2237 3 35993704 35997161 ECH
Mtr3g2237 3 35993704 35997161 Mtr5g2889 5 37446584 37449888 PCT