Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2874 ATGGTTTCGGCTGATAATAATGGTAAAGATGAAATCGAGGAATGTAACAATAATGGAAGTAAAGCCAATGAGTTTACTTCCATAGATATTTCAAGTTCTCGAAGAGCTATGGTGACGGATGAAAATCCTGGTAGAAAGTTCCCGAGCACATTGAGTGCTATTCCTAATAGGATCAACTTCTTCAAAATCGGTTCTGCGTCTGCCAAATTCAAGCGTCTTGCCACTCAGATGGACCAGGCTTCACAATCTGTGCCTTCTCCGAGTTCACATAGCTTAAGAGAACGCTTCAAGCACATGTTTTCAAAGAAACTCGACTGGGATTCGATGAAGAAGATGACAATAGAATGGATTAGGAATCCAATGAACATGGCCCTTTTTGCGTGGATCTTATGTGTTGCTGTTTCAGGTGGAATCCTGTTCCTTGTCATGACTGGTATGTTGAATGCTGTGATTCCAAAGAAGTCGGCAAGGAATGCGTGGTTTGAAGTAAACAATCAAATACTCAATGCTCTGTTTACACTGATGTGTTTGTACAAGCATCCGAAGTTATTCTACCACCTTGTACTTCTGTGCCGATGGAATTCAAAAGATATCGCCAAACTTAGAAAGGAGTACTGCAAGAATGGAACTTATAAGCCTCATGAATGGAAACACATAATGGTAGTGGTAATTCTCGGTCATGTGAACTGTTTCGCTCAGTATGCACTTTGCGGTCTAAACTTAGGTTATAAAAGATCTGAGCGCCCGGCCATTGGTGTTGGAATATGTATAACTTTTGCGATCGGTGCACCTGCAATTGCTGGTCTATATACAATCCTTAGTCCTCTAGGTAAAGATTATGATTCTGGATCAGATGAAGAATCGCAGGTTGAAATTGCTGCTGCTCAAAAGAAAGAGCAGATGAGATTGAAATCATTTGAGAGGAAATATTCATTTGCAACAAAAAATCAACTAAGAACAGTCGAAAATAGACCAAAGTGGAGTGGTGGAATACTTGACATTTGGGACGATATCTCTCAAGCATATTTATCACTTTTCTGTACTTTTTGTGCATTTGGTTGGAATATGGAGAGACTTGGCTTTGGAAACATGTATGTTCACATTGCCACTTTTATGCTTTTCTGTATGGCCCTTTGGATTTTCATCTTGGCTGCTGTTAATATTGAGGATGACACTGTTAGGCAATGTCTAGTAGGTGCTGGGATTGTTCTATGTTTTTTCGGTATGCTCTATGGTGGTTTTTGGAGGATCCAAATGAGAAAGAGGTATAATTTGCCTACTTATGACTTCTGTTTCGGCAAGCCTGCGGTTTCGGATTGCATACTTTGGCTATTCTGTTGTTGGTGCTCTCTTGCTCAAGAAATGCGAACGGGGGATGCCTATCATATCGTAGATGATAAATTCTTCAGCAAAGAAATTAACACTGTTGACCAACCGCCGATTTCACCTCTGCGCCGCGAAGGTGTGTCATCAACCAAATCTGGGACAAGTTCTCCTCTTGGTGTCAACTCGTCTCCTTCTACTTTCAAACCGTCAAGTCCTCTAAGTTCTAACAGTTTCTTTATGGAATATCATAGTCCAGATGGTCCACTATCTTCCGTAAAAGAAGAGCTTTCTGAAAAAGATAAAGATGTAACAATGATTCCACCAACTCCGCCGGTGATACAAAGAGAATCTCCTTAG 1683 0.407 MVSADNNGKDEIEECNNNGSKANEFTSIDISSSRRAMVTDENPGRKFPSTLSAIPNRINFFKIGSASAKFKRLATQMDQASQSVPSPSSHSLRERFKHMFSKKLDWDSMKKMTIEWIRNPMNMALFAWILCVAVSGGILFLVMTGMLNAVIPKKSARNAWFEVNNQILNALFTLMCLYKHPKLFYHLVLLCRWNSKDIAKLRKEYCKNGTYKPHEWKHIMVVVILGHVNCFAQYALCGLNLGYKRSERPAIGVGICITFAIGAPAIAGLYTILSPLGKDYDSGSDEESQVEIAAAQKKEQMRLKSFERKYSFATKNQLRTVENRPKWSGGILDIWDDISQAYLSLFCTFCAFGWNMERLGFGNMYVHIATFMLFCMALWIFILAAVNIEDDTVRQCLVGAGIVLCFFGMLYGGFWRIQMRKRYNLPTYDFCFGKPAVSDCILWLFCCWCSLAQEMRTGDAYHIVDDKFFSKEINTVDQPPISPLRREGVSSTKSGTSSPLGVNSSPSTFKPSSPLSSNSFFMEYHSPDGPLSSVKEELSEKDKDVTMIPPTPPVIQRESP* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2874 560 MobiDBLite consensus disorder prediction 479 514 - -
Mtr5g2874 560 PANTHER PLAC8 FAMILY PROTEIN-RELATED 10 558 - -
Mtr5g2874 560 Pfam PLAC8 family 327 456 IPR006461 -
Mtr5g2874 560 MobiDBLite consensus disorder prediction 528 560 - -
Mtr5g2874 560 Pfam Protein of unknown function (DUF2985) 115 193 IPR021369 -
Mtr5g2874 560 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 326 457 IPR006461 -
Mtr5g2874 560 MobiDBLite consensus disorder prediction 1 26 - -
Mtr5g2874 560 MobiDBLite consensus disorder prediction 485 514 - -
Mtr5g2874 560 PANTHER - 10 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2874 Mtr-Chr5 37319297 37322583 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2874 - - gmx:100795088 875.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2222 3 35869749 35872373 Mtr5g2874 5 37319297 37322583 ECH
Mtr5g2874 5 37319297 37322583 Mtr5g2874 5 37319297 37322583 ECH
Mtr3g2222 3 35869749 35872373 Mtr5g2874 5 37319297 37322583 PCT