Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2222 ATGATTTCAGTTGAAAATGGTATTGTAAATCACCAAGATGAAATTGAAGAATCTAATGGGAGTCAAGTGAAGGAATTTGCTTCTATAGATATTTCAACCACTCCAAAAACATTTCCAAGCAATGAAAATCCTCAAAGAAAGTTTCTCAAAATTGGTTCTGCATCTGCCAAAGTCAATGAGCTTGTTATTGAAAAAGACCAGATTTCACAGTCTGTGCCTTCTCCGCGTTCCGATGGCTTAAAGTCGCGATTCAGTACCATGTTTTCTCAGAAACTTGAACGGAATTCAGTCAAGAAAAGGTTCAAGGAATGGATCAAAAACCCAATGAACATGGCCCTTTTCGCGTGGGGAATCTGTGTCGCTGTATCGGGGGAGATTCTGTTCTTGGTCATGACAGGAATGTTGAATAATGTGCTAAAAACAAAGTCTGAGAGGAATACATGGTTTGAAATAAGTAACCAAATACTAAATGCTCTCTTTACACTAATGTCTTTGTATAATCATCCAAAGAGGTTCCACCATCTTGTTCTTTTGTGTAGATGGAGATCAAATGATATTACTACACTTAGAATGATTTTCTGCAAAAATGGTACTTCTAAGCCTCGTGAATGGGCACATATGATGGTAGTTGTTATTCTCCTTCATGTTAACTGTTTTGCTCAATATGCAGTTTGTAGTCTAAATTTAGGATATAAAAGATCTGAGAGACCAGCCATTGAACTTGGAATTGCCATATCCGTTGCAATTGCGGCACCGGCAACAGCTGGATTGTACATTATTCTTAGTCCACTTGGTAAGGACTATGATTGTGAGATAGATGAAGAATCACAGGTTCAAGTTAGAGACAAACCCTTCGAGAAAAAATACGCATTTGTATCTAAAGATCAACAAGGAGGAATTATAGAAAATAGACCGAAATGGAGTGGAGGAATACTTGACATTTGGAATGATCTATCATTATCATATCTCTCACTTTTCTGCCCTTTTTGTGCGTTTGGATGGAACATGGAGAGACTTGGATTTGGGAACATGTATGTTCATATAGCTACATTTATGCTGTTTTGTATGGCTCCCTTTTGGATATTTGTATTGGCTTCTGTTAGAATTGATGATGACAATGTTAGACAAGCACTAGTAGCTTTTGGAATCATTCTTAGTTTTTGTGGTTTACTTTATGGTGGATTTTGGAGGATTCAAATGAGAAAGAGGTTCAATTTGCCTGCCTATGAATTCTGTTTTGGAAAACCATCATTTTCTGATTGCACACTTTGGTTATGCTGCTGTTGGTGCTCTCTTGCTCAAGAAGCCAGGACTGGGAATAGTTATGATATCTTGGAAGATAAGTTATCCATGAAAGAAATTGATTCCCGCGATCAATCTTCGGCTACGGAAGACGTAGTATCAGCCAAATCTGGCTCAAGTTCTTCTCTTGAAAGAGGTAAAGATGGAACAATGAATCCCCCAATAGCATTAGTAGTACAAAGAGAAGCTCTTTAG 1497 0.3774 MISVENGIVNHQDEIEESNGSQVKEFASIDISTTPKTFPSNENPQRKFLKIGSASAKVNELVIEKDQISQSVPSPRSDGLKSRFSTMFSQKLERNSVKKRFKEWIKNPMNMALFAWGICVAVSGEILFLVMTGMLNNVLKTKSERNTWFEISNQILNALFTLMSLYNHPKRFHHLVLLCRWRSNDITTLRMIFCKNGTSKPREWAHMMVVVILLHVNCFAQYAVCSLNLGYKRSERPAIELGIAISVAIAAPATAGLYIILSPLGKDYDCEIDEESQVQVRDKPFEKKYAFVSKDQQGGIIENRPKWSGGILDIWNDLSLSYLSLFCPFCAFGWNMERLGFGNMYVHIATFMLFCMAPFWIFVLASVRIDDDNVRQALVAFGIILSFCGLLYGGFWRIQMRKRFNLPAYEFCFGKPSFSDCTLWLCCCWCSLAQEARTGNSYDILEDKLSMKEIDSRDQSSATEDVVSAKSGSSSSLERGKDGTMNPPIALVVQREAL* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2222 498 MobiDBLite consensus disorder prediction 456 489 - -
Mtr3g2222 498 MobiDBLite consensus disorder prediction 461 481 - -
Mtr3g2222 498 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 306 438 IPR006461 -
Mtr3g2222 498 PANTHER PLAC8 FAMILY PROTEIN-RELATED 50 461 - -
Mtr3g2222 498 Pfam PLAC8 family 307 437 IPR006461 -
Mtr3g2222 498 PANTHER - 50 461 - -
Mtr3g2222 498 Pfam Protein of unknown function (DUF2985) 103 181 IPR021369 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2222 Mtr-Chr3 35869749 35872373 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2222 - - mtr:MTR_3g072070 993.416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2222 3 35869749 35872373 Mtr5g2874 5 37319297 37322583 ECH
Mtr3g2222 3 35869749 35872373 Mtr3g2222 3 35869749 35872373 ECH
Mtr3g2222 3 35869749 35872373 Mtr5g2874 5 37319297 37322583 PCT