Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr5g2855 | ATGCCTTCACCAGTTCAATTCCAACGGTTCGACTCTAACACTGCTATTACTAACGGTGTTAACTGTCCGAAACAAATTCAAGCGTGTCGTTACGCGCTTTCTTCTTTAAAACCAACCGTTTCTGTTCCAGAAACGGTTGTAGACCACCACATGCACGTGGTGGGACAAAACCAATGCTACTCCGTCGTGATCCAAACAATCAACGCCTCCGTTTCAACCGTCTGGTCAGTCGTCCGCCGCTTTGATTATCCTCAAGGCTACAAACACTTTGTTAAAAGCTGCAACGTAGTTGCCTCCGGTGACGGCATTCGTGTTGGTGCTCTTCGTGAAGTTCGACTTGTTTCCGGTCTACCTGCTGTTTCAAGCACCGAGAGGTTGGATATTCTTGATGAAGAACGCCATGTTATTAGTTTCAGTGTTGTTGGTGGTGTTCATAGGTGTAGGAATTACCGGTCAGTGACAACGTTGCACGGTGATGGTAACGGAGGAACAGTTGTCATTGAATCATATGTTGTTGATGTACCACAGGGTAACACTAAGGAAGAAACATGTAGTTTTGCTGATACCATTGTTCGGTGTAATTTGCAGTCATTGGCTCAGATCGCAGAGAAACTGTGA | 618 | 0.4563 | MPSPVQFQRFDSNTAITNGVNCPKQIQACRYALSSLKPTVSVPETVVDHHMHVVGQNQCYSVVIQTINASVSTVWSVVRRFDYPQGYKHFVKSCNVVASGDGIRVGALREVRLVSGLPAVSSTERLDILDEERHVISFSVVGGVHRCRNYRSVTTLHGDGNGGTVVIESYVVDVPQGNTKEETCSFADTIVRCNLQSLAQIAEKL* | 206 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr5g2855 | 205 | Pfam | Polyketide cyclase / dehydrase and lipid transport | 65 | 203 | IPR019587 | - | |
| Mtr5g2855 | 205 | SUPERFAMILY | Bet v1-like | 59 | 202 | - | - | |
| Mtr5g2855 | 205 | Gene3D | - | 26 | 205 | IPR023393 | - | |
| Mtr5g2855 | 205 | PANTHER | ABSCISIC ACID RECEPTOR PYL4 | 31 | 204 | - | - | |
| Mtr5g2855 | 205 | CDD | PYR_PYL_RCAR_like | 59 | 203 | - | - | |
| Mtr5g2855 | 205 | PANTHER | - | 31 | 204 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr5g2855 | Mtr-Chr5 | 37146738 | 37148264 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr5g2855 | K14496 | - | gmx:100798803 | 293.508 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Mtr3g2208 | 3 | 35699625 | 35700980 | Mtr5g2855 | 5 | 37146738 | 37148264 | ECH | |
| Mtr7g1701 | 7 | 32587178 | 32588526 | Mtr5g2855 | 5 | 37146738 | 37148264 | ECH | |
| Mtr4g0364 | 4 | 4346030 | 4347083 | Mtr5g2855 | 5 | 37146738 | 37148264 | ECH | |
| Mtr5g2855 | 5 | 37146738 | 37148264 | Mtr5g2855 | 5 | 37146738 | 37148264 | ECH | |
| Mtr3g2208 | 3 | 35699625 | 35700980 | Mtr5g2855 | 5 | 37146738 | 37148264 | PCT |