Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2208 ATGCCATCAAGTTTTTCTCTTCAGCTTGAGAGATTCAACCGTACAACCGATGCAACCACCTACTTAGCCATAGCAAACGGTGCAAACTGCCCTAGACAACCACAAACACCACCACCCACGGCGGCGCGTCGTTTAGTTATCCCATTTCCACCATCTTTATCTTCTTCCAACGGAGGAACCCTAGTCCTAGACACGTTATCTCTTCACCACGCACACATGGTTGGACCAAACCAGTGCTGCTCCGTCGTCACACAAACAATCTCCGCCCCTATCTCCGCCGTATGGCCTGTAGTTCGACGCTTCGAAAATCCACAAGGATACAAAAACTTCGTCAAAAGCTGCCAAGTCATCACCGGAGAAAACATCACCGTCGGCGCCGTCCGTGAAGTTCGTGTTGTTTCAGGACTTCCAGCTGAGTCCAGCACTGAAAGGCTGGAGATTCTTGACGATGAACGCCACGTCATCAGCTTCAGTGTTGTTGGTGGGGACCACCGTCTGAGAAACTACCGGTCGGTGACGACGCTTCATTCTGTCGACGGAGATAGGACACTTGTCATTGAATCATACGTTGTTGATGTACCGCAAGGTAACACGAAGGAGGAAACGTGTTTTTTTGTTGATACTATTGTACGTTGTAATTTACAGTCGTTGGGTCAGATCGCTGAGAATACTATCAGAAACTCTGAGTCTGAGCAATAA 699 0.4864 MPSSFSLQLERFNRTTDATTYLAIANGANCPRQPQTPPPTAARRLVIPFPPSLSSSNGGTLVLDTLSLHHAHMVGPNQCCSVVTQTISAPISAVWPVVRRFENPQGYKNFVKSCQVITGENITVGAVREVRVVSGLPAESSTERLEILDDERHVISFSVVGGDHRLRNYRSVTTLHSVDGDRTLVIESYVVDVPQGNTKEETCFFVDTIVRCNLQSLGQIAENTIRNSESEQ* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2208 232 Pfam Polyketide cyclase / dehydrase and lipid transport 79 219 IPR019587 -
Mtr3g2208 232 PANTHER - 39 231 - -
Mtr3g2208 232 Gene3D - 51 232 IPR023393 -
Mtr3g2208 232 CDD PYR_PYL_RCAR_like 79 222 - -
Mtr3g2208 232 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER 39 231 - -
Mtr3g2208 232 SUPERFAMILY Bet v1-like 78 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2208 Mtr-Chr3 35699625 35700980 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2208 K14496 - gmx:121174020 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2208 3 35699625 35700980 Mtr5g2855 5 37146738 37148264 ECH
Mtr7g1701 7 32587178 32588526 Mtr3g2208 3 35699625 35700980 ECH
Mtr4g0364 4 4346030 4347083 Mtr3g2208 3 35699625 35700980 ECH
Mtr3g2208 3 35699625 35700980 Mtr3g2208 3 35699625 35700980 ECH
Mtr3g2208 3 35699625 35700980 Mtr5g2855 5 37146738 37148264 PCT