Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2848 ATGGCTGAAGATCACTTCCTCAAGCAAAAGAAATATCCATTCATCTTAACTCTCTCTATCTTACTCATTTCAGTCACTTTCTTCCTTCTCACAACCACCACCACCACCTTCAACCCTCTTCTTTTCTATTCTAATATCCAACACCCACACCAACCAATTGCAAAACCACCCTTAGTCTTAGATTCAGATTCTACTACAGTTTCAGAAGAACTAAAACTACCCTCTAAGGAAGAAGAATCTCCACAAAAGGAAGAAGCTCTCAATATTGATTGGAAGCTATGTAAGAAACCTGTGACGGTTGATTATATACCATGTTTGGATAATTATAAAGCTATTCAAGCTTTGAAATCAAGGAGGCATATGGAACATAGAGAAAGACATTGTCCTGATACTAGTTTGAACTGTTTGTTGCCTCTTCCTAAAGGGTATAAAGTTCCAGTTCATTGGCCTAAGAGTAGGGACATGATTTGGTACGATAATGTCCCTCATCCAAAGCTAGTTGAGTACAAGAAAGACCAACATTGGGTTGTGAAATCTGGTGAATATCTAATATTTCCAGGAGGTGGTACTCAATTCAAAGACGGAGTTGATCATTACATTGAGTTCATAGAAAAGACATTAGCAAAAATTCAATGGGGAAAGCATATCAGGGTTGTTCTAGATGTTGGATGCGGCGTTGCTAGCTTTGGTGGCTATCTGCTAGACAAAAATGTAATTACCATGTCATTTGCTCCAAAGGATGAACACGAAGCCCAGATACAGTTTGCTTTGGAGCGAGGAATTCCCGCAACTCTTTCGGTAATTGGAACACAAAAGTTGACTTTTCCTGACAATGGTTTTGATTTGATTCATTGCGCACGATGCAGAGTTCACTGGGATGCAGATGGTGGGAAACCGTTATACGAACTCAATAGGATTCTTAGACCTGGCGGTTACTTTGCATGGTCTGCAACACCAGTTTATCGTGATGATGATCGAGATCAGAAAGTATGGAAAGCCATGGTGGCTATAACAAAAGCTATGTGCTGGAAGGTTGTCGCTAAGGCCGACGATTCATCTGGAATTGGGCTTGTTATATACCAGAAGCCTACTTCATCTTCTTGTTATGAGAAACGTACAGAGAACAATCCACCTTTATGTGAAAATGCGGATGGGAAAAATAGCTCATGGTATGCCCGACTCAATAGTTGCCTTACCCCTCTTCCGGTTGATGGTAAGGGTAAACCACAGAGCTGGCCCATGCCTTGGCCTCAGAGGCTTACTAGTAAGCCTCCTAGCTTACCTAATGATTCAGATGCCACTGATGAGTTCAACAAGGACAGCAACCGCTGGTCTCAACTAGTGTCAAATGTTTATGCTGACGGTCTTTCGATAAATTGGTCAAGTGTTCGAAATGTAATGGACATGAATGCTGGTTATGCAGGATTTGCCGCATCTCTTATTGATAGACCAATCTGGGTGATGAATGTAGTACCTATTGATGTCCCAGATACCCTTTCTATTATATTGGACCGAGGATTAATAGGAATGTATCATGATTGGTGCGAGTCCTTTAATACCTATCCGCGCACATATGACCTACTTCATGCTAGCTTTCTTTTCAAATATCTTGAGCAAAGATGCGGCCTTGTAGATGTGATCGTGGAGATAGATCGCATATTGAGACCAGATGGATATCTTGTGATTCATGATTCCATGGAAATGCTTAACAAACTCAGTCCAACCTTGCGTTCACTACACTGGTCTGTAAAGTTGCATCAAAATCAGTTTCTTGTCGGAAGGAAAAGTTTTTGGCGTCCCACAAGCTTAGGAAACTAA 1818 0.412 MAEDHFLKQKKYPFILTLSILLISVTFFLLTTTTTTFNPLLFYSNIQHPHQPIAKPPLVLDSDSTTVSEELKLPSKEEESPQKEEALNIDWKLCKKPVTVDYIPCLDNYKAIQALKSRRHMEHRERHCPDTSLNCLLPLPKGYKVPVHWPKSRDMIWYDNVPHPKLVEYKKDQHWVVKSGEYLIFPGGGTQFKDGVDHYIEFIEKTLAKIQWGKHIRVVLDVGCGVASFGGYLLDKNVITMSFAPKDEHEAQIQFALERGIPATLSVIGTQKLTFPDNGFDLIHCARCRVHWDADGGKPLYELNRILRPGGYFAWSATPVYRDDDRDQKVWKAMVAITKAMCWKVVAKADDSSGIGLVIYQKPTSSSCYEKRTENNPPLCENADGKNSSWYARLNSCLTPLPVDGKGKPQSWPMPWPQRLTSKPPSLPNDSDATDEFNKDSNRWSQLVSNVYADGLSINWSSVRNVMDMNAGYAGFAASLIDRPIWVMNVVPIDVPDTLSIILDRGLIGMYHDWCESFNTYPRTYDLLHASFLFKYLEQRCGLVDVIVEIDRILRPDGYLVIHDSMEMLNKLSPTLRSLHWSVKLHQNQFLVGRKSFWRPTSLGN* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2848 605 MobiDBLite consensus disorder prediction 406 438 - -
Mtr5g2848 605 Gene3D Vaccinia Virus protein VP39 425 595 IPR029063 -
Mtr5g2848 605 CDD AdoMet_MTases 219 313 - -
Mtr5g2848 605 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 435 585 IPR029063 -
Mtr5g2848 605 Gene3D Vaccinia Virus protein VP39 178 348 IPR029063 -
Mtr5g2848 605 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 125 324 IPR029063 -
Mtr5g2848 605 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 3 602 IPR004159 GO:0008168
Mtr5g2848 605 PANTHER PMT16, PUTATIVE-RELATED 3 602 - -
Mtr5g2848 605 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 101 589 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2848 Mtr-Chr5 37076753 37080529 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2848 - - gmx:100800390 988.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2848 5 37076753 37080529 Mtr5g2848 5 37076753 37080529 ECH
Mtr3g2198 3 35589156 35592956 Mtr5g2848 5 37076753 37080529 PCT