Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2198 ATGCTAATTTCTTCCTTTGTAAAAGCACAATCCTCTCTTTCTTTCTCTAGTTGTATCAAATCAAGAATGACAAATTTTGTTGAAACATTCTACAAAGACAGAAAGTTTCCATTCATTTTCACCCTCTTTGCCTTGCTTATTTGTGTCACAATCATCCTCTTTGCCAACACCACCATCAACTTCACCGCCTCTAATCCAATTGCCTTCTACCCCGACAACGTAAAAGTGCAGCAACCATTCAATCACCATGATCCTCCAGCACTCACAGATTCAAAAGATCATCAAGAACAACCACTAGACCACGATGCGCCTCCAGTACTCACAGATTCAAAAGATCATCAAGAAGAACCACTACACCACGATGCGCCTCCAGTACTTACAGATTCAAAAGATCGTCAAGAACAACTTCCACCAAATCAACATGAAGGAGGACTGCTCCATTGGGAAAAGGCTTTTGATAATAACGTTTCTGTTGATCTGAATATGGTGGATTGGAAGCTTTGTAAAGGTGTTTTAGCGGTAGATTATATACCATGCTTGGATAATCTTAAGGCTATTAAGGCTTTGAAAAGAAGGAGGCACATGGAGCATAGGGAAAGACATTGTCCTAAATCTACTCCTCATTGTTTGTTGCCTCTTCCCAAAGGGTATAAAGTTCCGGTTTCATGGCCTAAGAGCAGGGACATGATTTGGTATGATAATGTACCTCATCCAAAGCTTGTTGAATACAAGAAGGAGCAAAATTGGGTGGTGAAATCAGGTGAATATCTTGTATTTCCCGGAGGTGGTACTCAATTCAAAGAAGGAGTTAACCATTATATTAATTTCATAGAGAAGACACTACCAGCAATTCAATGGGGAAAGAATATCAGGGTTGTGCTTGATGCTGGTTGTGGAGTGGCTAGCTTTGGAGGGTATCTTTTGGACAGGAATGTTATTACTATGTCATTTGCACCAAAGGATGAGCATGAAGCTCAGATACAATTTGCTTTGGAGCGAGGAATTCCAGCAACTCTTTCTGTCATTGGAACACAAAAGCTGACATTTCCTGATAATGGATTTGATTTGATCCATTGTGCACGATGTAGGGTGCATTGGGATGCTGATGGTGGTAAGCCATTATTCGAACTCAATAGGATTCTTAGGCCTGGTGGTTTCTTTGCATGGTCAGCTACACCAGTTTATCGCGATGATGAAAGAGATCAGAAAGTATGGAATGCCATGGTGACTGTAACAAAAGAAATGTGTTGGACTGTTGTGGCTAAGACTCTTGATTCATCCGGAATTGGACTTGTTATATACCAGAAGCCTACGTCATCCTCCTGCTATGAGAAACGCAAACAGAACAAACCTCCTATATGTAAAAACAATGAAAGCAAACAAATCTCATGGTATACCAAACTGAGCAGCTGCCTTATTCCTCTTCCGGTGGATGCCGCGGCGAGCTGGCCCATGTCTTGGCCTAATAGGCTTACCAGTATACCTCCTAGCCTATCTTCTGAACCAGATGCCAGCGACGTGTTCAACAATGATACTAAACATTGGTCTAGAATAGTTTCAGACATTTATCTGGAAGCTCCTGTAAATTGGTCAAGTGTTCGAAATATAATGGACATGAATGCCGGTTTTGGAGGATTTGCTGCAGCTCTTATCGATCGACCATTGTGGGTGATGAATGTAGTACCAATTGATATGCCAGATACTCTTTCTGTCATATTTGACAGGGGATTAATAGGAATTTATCATGATTGGTGTGAATCTTTGAGTACTTATCCTCGGACATATGATCTTGTTCATTCAAGCTTTCTCTTCAAAAGCTTTAACCAAAGATGTGACATTGTAGATGTGGTTGTGGAAATAGATCGCATATTGAGACCAGATGGGTATCTCTTGGTTCAGGATTCAATGGAAGCAATTAGAAAGTTGGGTGCAATATTGAATTCACTTCATTGGTCTGTGACATCTTATCAAAATCAATTTCTTGTTGGTAGGAAGAGCTTCTGGCGTCCAAAGCCATAG 2019 0.4076 MLISSFVKAQSSLSFSSCIKSRMTNFVETFYKDRKFPFIFTLFALLICVTIILFANTTINFTASNPIAFYPDNVKVQQPFNHHDPPALTDSKDHQEQPLDHDAPPVLTDSKDHQEEPLHHDAPPVLTDSKDRQEQLPPNQHEGGLLHWEKAFDNNVSVDLNMVDWKLCKGVLAVDYIPCLDNLKAIKALKRRRHMEHRERHCPKSTPHCLLPLPKGYKVPVSWPKSRDMIWYDNVPHPKLVEYKKEQNWVVKSGEYLVFPGGGTQFKEGVNHYINFIEKTLPAIQWGKNIRVVLDAGCGVASFGGYLLDRNVITMSFAPKDEHEAQIQFALERGIPATLSVIGTQKLTFPDNGFDLIHCARCRVHWDADGGKPLFELNRILRPGGFFAWSATPVYRDDERDQKVWNAMVTVTKEMCWTVVAKTLDSSGIGLVIYQKPTSSSCYEKRKQNKPPICKNNESKQISWYTKLSSCLIPLPVDAAASWPMSWPNRLTSIPPSLSSEPDASDVFNNDTKHWSRIVSDIYLEAPVNWSSVRNIMDMNAGFGGFAAALIDRPLWVMNVVPIDMPDTLSVIFDRGLIGIYHDWCESLSTYPRTYDLVHSSFLFKSFNQRCDIVDVVVEIDRILRPDGYLLVQDSMEAIRKLGAILNSLHWSVTSYQNQFLVGRKSFWRPKP* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2198 672 CDD AdoMet_MTases 293 387 - -
Mtr3g2198 672 MobiDBLite consensus disorder prediction 86 128 - -
Mtr3g2198 672 MobiDBLite consensus disorder prediction 80 143 - -
Mtr3g2198 672 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 200 408 IPR029063 -
Mtr3g2198 672 Gene3D Vaccinia Virus protein VP39 266 466 IPR029063 -
Mtr3g2198 672 Gene3D Vaccinia Virus protein VP39 484 663 IPR029063 -
Mtr3g2198 672 PANTHER PMT16, PUTATIVE-RELATED 26 101 - -
Mtr3g2198 672 PANTHER PMT16, PUTATIVE-RELATED 155 671 - -
Mtr3g2198 672 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 26 101 IPR004159 GO:0008168
Mtr3g2198 672 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 155 671 IPR004159 GO:0008168
Mtr3g2198 672 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 505 637 IPR029063 -
Mtr3g2198 672 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 175 659 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2198 Mtr-Chr3 35589156 35592956 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2198 - - mtr:MTR_3g071530 1351.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2198 3 35589156 35592956 Mtr3g2198 3 35589156 35592956 ECH
Mtr3g2198 3 35589156 35592956 Mtr5g2848 5 37076753 37080529 PCT