Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2845 ATGGAAACTACACAAGAGCAACCATCTAAACCCAACAACATCGACGATGAAGAAGACGAAGAAGAAGAAGAAGAAGAAGAATACGAAGACGAAAACGACGACGAAATCGACGAAGAACCAAATCAACAAACCCTAAAATCAAAACTACGCAATCAACGTTTCAAAGTAGAAACATTTTCCCGTCGATTAGCCTCCGAACAAGTTCCAATTCGAGTCCACGATGTTTTCATAACCGGAAACACCAAAACCAAAGATTGGATAATCGAAGCTGAACTCGATGGAATCGAGAAAGCCACTACAATGCAGGAACTCATGTACGCTTCGCAGATTGCTGCTGCGAGGCTTCAACGGCTTGAGATTTTTGATTCGTGTAGGGTTAAGCTTGAAGCTGGACCGGAAGAATTGCCGAATACTGCAAATGTTGTTGTTGATGTTGTTGAGTCGGAGAGTAAGCTTACTGGTGGATTTGGTGTTTATGTGAAACCATCGGTTAAGGCATGGACTACAGAAGGAACTGTTAAGTACAAGAACCTTTTTGGTTATGGTGATCTATGGGATGCTTCTTTGGCTTATGGCGGCAAGCAAGCGACAGAGGCGAGCTTTGGGGTATATGCTCCTCGTCTGAAAGGATTGTTAACTCCACTTGTGGCACGGTTGTTCATGCTTTCTCAAGATTTGCAGGAGTTTTCTTCTTACAAAGAGCAATTGTTAGGCATGTCTCTTGACTTGATATCGACAAAGCACCAGGACTTGGTGTACACTCTTGGATGGCGTACCTTAACAGATCCATCACAAATGGCATCAAGGTCTATAAGGAGGCAGCTTGGGCATGGGTTACTGTCGTCTTTGAAATATACATTTAAATATGATAGGAGAGATTCACGTATTAGGCCTACAAAAGGATATGCTTTTGTTTCCACAACTCATTTTGGTGGTCTAGCACCGAATCACCAGAGCTTGCGGTTTCTGCGCCAGGAGTTTGATGTTCGCTTTGCTGTCCCTTTTGGATTTTATAATACAGCACTGAACCTTGGCATATCTGCTGGGGCTGTTTTTCCATGGGGCCAAGGGTTCAGGACTAAGCCATCTCCCCTCCCCGAAAGGTTTTATTTGGGTGGTGATTTCTCTCCAGTTTGCACCCTAGGAGGACCAAGAACTTTATGGGGATTCAAAACTAGGGGAGTAGGTCCTACTGAACCGCGAAGGCAAAAAAGTGACGAAGAAAATGATGACACCCTTGACTTCATTGGAGGTGATCTTGCTGTGACTGCTTTTGCAGACCTATCTTTTGATCTTCCCATTAGATGGTTGAAAGAACAAGGAATACATGGACACATTTTTGCTGGTTCTGGGAATGCTGCTAAATTAACTCAGAATGAATTCAGAAACTTTTCTCCTCGAAAGTTCTTAGATTCCTTTCGGTTGTCTGCTGGATGTGGAATTGTTATTCCTACTAGACTCTTCCGCCTAGAGGCTAACTATTTCCACATTCTTAGGAAGGATGAGCATGATAATGGGAAGACTGGATTTAAGTTCAGCTTCTCAGCTCCTTTTGGCAGCTGA 1563 0.4344 METTQEQPSKPNNIDDEEDEEEEEEEEYEDENDDEIDEEPNQQTLKSKLRNQRFKVETFSRRLASEQVPIRVHDVFITGNTKTKDWIIEAELDGIEKATTMQELMYASQIAAARLQRLEIFDSCRVKLEAGPEELPNTANVVVDVVESESKLTGGFGVYVKPSVKAWTTEGTVKYKNLFGYGDLWDASLAYGGKQATEASFGVYAPRLKGLLTPLVARLFMLSQDLQEFSSYKEQLLGMSLDLISTKHQDLVYTLGWRTLTDPSQMASRSIRRQLGHGLLSSLKYTFKYDRRDSRIRPTKGYAFVSTTHFGGLAPNHQSLRFLRQEFDVRFAVPFGFYNTALNLGISAGAVFPWGQGFRTKPSPLPERFYLGGDFSPVCTLGGPRTLWGFKTRGVGPTEPRRQKSDEENDDTLDFIGGDLAVTAFADLSFDLPIRWLKEQGIHGHIFAGSGNAAKLTQNEFRNFSPRKFLDSFRLSAGCGIVIPTRLFRLEANYFHILRKDEHDNGKTGFKFSFSAPFGS* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2845 520 MobiDBLite consensus disorder prediction 13 38 - -
Mtr5g2845 520 MobiDBLite consensus disorder prediction 1 44 - -
Mtr5g2845 520 Gene3D membrane protein fhac 69 148 - -
Mtr5g2845 520 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 16 516 IPR039910 -
Mtr5g2845 520 PANTHER OUTER MEMBRANE OMP85 FAMILY PROTEIN 16 516 - -
Mtr5g2845 520 Coils Coil 14 38 - -
Mtr5g2845 520 Pfam Omp85 superfamily domain 177 516 IPR000184 GO:0019867
Mtr5g2845 520 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 152 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2845 Mtr-Chr5 37027861 37033897 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2845 K07277 - gmx:100802876 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2845 5 37027861 37033897 Mtr5g2845 5 37027861 37033897 ECH
Mtr3g2194 3 35542489 35547914 Mtr5g2845 5 37027861 37033897 PCT