Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2194 ATGAGGTCGCGTGTTCGATCCACGCTCACCGCAATTAGCTTTTTTAATTTCTTGTCCGAAAAGAAACACTGCTATTCATTTTTTTTTCCCCTTCCCTTTCTTTTTGGTGCGTTGCTTCTACTCACTCACTCCACTTTCATCTCACAACGAGAACATTCCAAAACCGATCGAATCATGGAAAATTCACCAAACCCTAACAATCCCAAACCCAACGAAGAAGAAATCGACGAACACGAAAACGAAAACGAAGAAGAAGAAGATGACGAAGACGATGTTCCACAATCCCCACTCTCCCGTCTCCGCGACCAAAAATTCAAACTCGAAACCCTATCCCGACGCCTCTCATCGGAGCTAGTTCCAATCCGAGTCCACGACGTGATAATTCGCGGCAACACGAAAACCAAAGATTGGGTGATCGAAGCTGAACTCAAGGGAATCGAAGATGTTACCACCATGCAGGAGCTTATTCGTGCATCGGAGATTGTGCTTGCTAGGCTTCAGAGTCTCGGGGTTTTTGAATCTAGTAAGATTAGTCTTGAGCCTGGACCGGTTGAGTTGCCGAATACTGCGAATGTTGTTGTTGATATTGTTGAGGCTGCTAGTAGAGTTTCTGGTGAATTTGGTGTTTATACCAAACCCGCGACTAGTTCTTGGACTGGTGAAGGTACTATTAAGTACAAAAACTTGTTAGGTTATGGTGATCTATGGGATGCTTCTTTGGCTTACGGTGCAAACCAAGCAACAGAGGTGAGTGTAGGGTTATATGCCCCTCGACTTAAAGGAACTTCAAATCCCGTTGTAGCACGACTGTCCATGCTTTCCCAAGATTGGCAGGAGTTTTCTTCGTACAAAGAGCAATTGTTGGGCATGTCTCTTGGCTTAATCTCAACAAAGCACCATGATTTGACATACACTTTTGGATGGCGTACCTTAACGGATCCATTGCAAATGGCATCCAGGTCTGTAAGAAGGCAGCTTGGGCACGGTTTGTTATCATCTTTGAAGTATACGTTTAAAATTGATAGGAGAAACTCACCAATTAGGCCCACAAAAGGACTTGCCTTTGTTTCTACCACTCACCTTGGTGGCCTTACACCAGATAATCGAAGCTTGCGGTTTCTGCGTCAGGAGTTTGATGCTCGGTATGCTGTCCCTTTTGGGTTTTATAATACAGCACTGAACCTAGGGATTTCTGCTGGTGCTATTTTTCCATGGGGACATGATTTCATGAAAAAGCCATCTCCCCTTCCTGAAAGGTTTTATTTGGGTGGTGACTTCTCTCCAGTTTGTACCCTAGGAGGACCAATGACATTGTGGGGATTTAAAACTAGGGGATTAGGTCCTGCTGAACCACGAAGACAAAGCAGAGATGTATTCAATGATGACAATAGTGATTCCTCTAAATGGGACTCCGTTGGAGGAGATCTTTCTGTTACAGCTTTTGCAGACCTCTCGTTTGATCTTCCAATTAGGTGGTTAAGAGAACACGGGGTCCATGGTCATGTTTTTGCTGGTGCTGGGAATACTGCTAAATTAACTCAGAATGAATATAAGCACTTCTCTCCTCGGAGGTTCCTAGAATCCTTCCGTTCATCAGTGGGATGTGGATTTGTTGTTCCTACTAGTCTTTTCCGCCTAGAGGCTAACTACTACTACGTGCTCAAGCAGACTGAACATGATCGTGGTAAAAATGGATTTAGGTTCAGCTTCTCAGCTCCTTCATAG 1725 0.4435 MRSRVRSTLTAISFFNFLSEKKHCYSFFFPLPFLFGALLLLTHSTFISQREHSKTDRIMENSPNPNNPKPNEEEIDEHENENEEEEDDEDDVPQSPLSRLRDQKFKLETLSRRLSSELVPIRVHDVIIRGNTKTKDWVIEAELKGIEDVTTMQELIRASEIVLARLQSLGVFESSKISLEPGPVELPNTANVVVDIVEAASRVSGEFGVYTKPATSSWTGEGTIKYKNLLGYGDLWDASLAYGANQATEVSVGLYAPRLKGTSNPVVARLSMLSQDWQEFSSYKEQLLGMSLGLISTKHHDLTYTFGWRTLTDPLQMASRSVRRQLGHGLLSSLKYTFKIDRRNSPIRPTKGLAFVSTTHLGGLTPDNRSLRFLRQEFDARYAVPFGFYNTALNLGISAGAIFPWGHDFMKKPSPLPERFYLGGDFSPVCTLGGPMTLWGFKTRGLGPAEPRRQSRDVFNDDNSDSSKWDSVGGDLSVTAFADLSFDLPIRWLREHGVHGHVFAGAGNTAKLTQNEYKHFSPRRFLESFRSSVGCGFVVPTSLFRLEANYYYVLKQTEHDRGKNGFRFSFSAPS* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2194 574 Coils Coil 71 91 - -
Mtr3g2194 574 MobiDBLite consensus disorder prediction 76 92 - -
Mtr3g2194 574 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 71 572 IPR039910 -
Mtr3g2194 574 PANTHER OUTER MEMBRANE OMP85 FAMILY PROTEIN 71 572 - -
Mtr3g2194 574 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 213 572 - -
Mtr3g2194 574 Gene3D membrane protein fhac 120 199 - -
Mtr3g2194 574 MobiDBLite consensus disorder prediction 51 98 - -
Mtr3g2194 574 MobiDBLite consensus disorder prediction 449 464 - -
Mtr3g2194 574 MobiDBLite consensus disorder prediction 446 466 - -
Mtr3g2194 574 Pfam Surface antigen variable number repeat 121 198 IPR010827 GO:0019867
Mtr3g2194 574 Pfam Omp85 superfamily domain 228 571 IPR000184 GO:0019867
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2194 Mtr-Chr3 35542489 35547914 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2194 K07277 - gmx:100785408 832.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2194 3 35542489 35547914 Mtr3g2194 3 35542489 35547914 ECH
Mtr3g2194 3 35542489 35547914 Mtr5g2845 5 37027861 37033897 PCT