Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2826 ATGATCAGCCCACAAGATTGGCCTGAGCCAATAATCCGAGTTCAATCTTTATCCGAAAGTTGCAAAGATTCAATCCCTCAAAGATATATCAAACCCCTTAGTGACCGTCCATCAATAAACTCTATTTTAGAAACAATCAATAATATCCCAATAATTGACCTTCGAGGTTTATATAGTACTAACCCACATGAAAAAGCTTCAACCTTCAAGCAAATCTCTGAGGCTTGTAAAGAGTGGGGATTCTTTCAAATTGTTAACCATGGTGTTAGCCATGATTTGATGGATTTAGCTAAGGAAACTTGGCGTCAATTTTTTCACTTGCCTATGGAAGTGAAACAATTATATGCAAACTCACCAAAAACTTATGAAGGGTATGGTAGTAGACTTGGTGTTAAGAAAGGTGCTATTCTTGATTGGAGTGATTACTATTATCTTCATTATCTTCCTTTGTCTTTGAAGGACTACAACAAATGGCCTTCTCTGCCTCCCTCTTGCAGGGAGGTGTTTGATGAATATGGGATAGAATTGGTGAAGTTATGTGAGCGGTTGATGAAAGTTCTATCTATAAACCTTGGATTAGAAGAGAATTTTCTTCAAAATGCTTTTGGAGGTGAAGATATTGGTGCTTGCATAAGGGTGAATTATTTTCCCAAATGTCCACAGCCAGAGTTGACTCTTGGTTTATCATCACACTCAGATCCAGGAGGCATGACTCTTTTGCTACCAGATGATCAAATACATGGTCTTCAAGTTCGTAAAGGTGATAATTGGATTACGGTGAAACCTGTTAGGAATGCATTTATTGTCAATATTGGTGATCAAATTCAGGTTCTAAGCAATGCAATCTACAGGAGTGTAGAGCATAGAGTAATAGCAAACTCACACAAAGAGAGAGTTTCCTTAGCCTTCTTCTACAATCCCAAAAGTGACATTCCAATAGAGCCAGCAAAAGAATTGGTAAAGCCAGATAAACCTGCCCTCTACCCTGCTATGACCTTTGATGAATATAGGCTTTTCATTAGAATGAGGGGTCCATGTGGAAAATCTCAAGTTGAATCTTTAAAATCTCCAAGATGA 1077 0.3798 MISPQDWPEPIIRVQSLSESCKDSIPQRYIKPLSDRPSINSILETINNIPIIDLRGLYSTNPHEKASTFKQISEACKEWGFFQIVNHGVSHDLMDLAKETWRQFFHLPMEVKQLYANSPKTYEGYGSRLGVKKGAILDWSDYYYLHYLPLSLKDYNKWPSLPPSCREVFDEYGIELVKLCERLMKVLSINLGLEENFLQNAFGGEDIGACIRVNYFPKCPQPELTLGLSSHSDPGGMTLLLPDDQIHGLQVRKGDNWITVKPVRNAFIVNIGDQIQVLSNAIYRSVEHRVIANSHKERVSLAFFYNPKSDIPIEPAKELVKPDKPALYPAMTFDEYRLFIRMRGPCGKSQVESLKSPR* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2826 358 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 355 - -
Mtr5g2826 358 Pfam non-haem dioxygenase in morphine synthesis N-terminal 49 160 IPR026992 -
Mtr5g2826 358 Pfam 2OG-Fe(II) oxygenase superfamily 209 307 IPR044861 -
Mtr5g2826 358 PRINTS Isopenicillin N synthase signature 72 89 - -
Mtr5g2826 358 PRINTS Isopenicillin N synthase signature 267 293 - -
Mtr5g2826 358 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 8 355 - -
Mtr5g2826 358 SUPERFAMILY Clavaminate synthase-like 11 340 - -
Mtr5g2826 358 Gene3D - 10 341 IPR027443 -
Mtr5g2826 358 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 206 307 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2826 Mtr-Chr5 36810842 36816205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2826 49 355 Glycosyltransferase AT5G59530 32.602 6.65e-45 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2826 - - gmx:100794125 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2172 3 35282802 35286644 Mtr5g2826 5 36810842 36816205 ECH
Mtr5g2826 5 36810842 36816205 Mtr5g2826 5 36810842 36816205 ECH