Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2172 ATGTTGAAGAGCCACAAAGATTGGCCAGAGCCCATAATCCGAGTTCAATCATTGTCTGAAGGATGTAAAGATTCAATCCCTGATAGGTATATCAAGCCTCCAACTGATAGGCCAATTGTAGACACTTCTTCTTATGATGATATCAATATTCCAATCATAGACCTTGGAGGGTTAAATGGTGATGACCTTGATGTTCATGCTTCAATCCTTAAGCAAATTTCTGATGCTTGTCGTGATTGGGGTTTCTTCCAAATTGTAAACCATGGAGTGAGTCCTGATTTGATGGACAAAGCTAGGGAAACTTGGCGTCAATTCTTTCACTTGCCTATGGAGGCTAAGCAACAATATGCAAACTCTCCAACAACTTATGAAGGGTATGGAAGTAGACTTGGTGTTGAGAAAGGGGCTATTCTTGATTGGAGTGATTACTACTTTTTGCACTACCTTCCTGTTTCAGTCAAGGACTGCAACAAATGGCCTGCTTCTCCACAATCTTGCAGGGAAGTGTTTGATGAGTATGGGAAAGAGCTAGTGAAACTAAGTGGAAGATTAATGAAGGCTTTGTCATTAAACCTTGGATTAGAAGAAAAAATTCTTCAAAATGCATTTGGGGGTGAAGAGATAGGAGCATGCATGAGAGTGAATTTTTATCCAAAGTGTCCAAGGCCAGAATTGACATTAGGTCTATCATCACACTCAGACCCAGGAGGTATGACTATGTTGCTTCCAGATGACCAAGTGGCTGGTCTTCAAGTTCGAAAATTTGATAATTGGATTACGGTCAACCCTGCTAGACATGGCTTCATAGTCAACATTGGTGACCAAATACAGGTTCTAAGCAATGCAACATACAAGAGTGTGGAGCACAGAGTGATAGTGAATTCAGATCAAGAGAGACTTTCTCTTGCATTTTTCTATAACCCAAGAAGTGATATACCCATTGAGCCATTAAAACAGCTTATCACACCTGAAAGACCTGCACTCTACCCAGCAATGACCTTTGATGAGTACAGACTCTTCATTAGAATGAGGGGACCTTGTGGCAAATCTCAAGTTGAATCTATGAAGTCTTCAAAATAA 1080 0.4046 MLKSHKDWPEPIIRVQSLSEGCKDSIPDRYIKPPTDRPIVDTSSYDDINIPIIDLGGLNGDDLDVHASILKQISDACRDWGFFQIVNHGVSPDLMDKARETWRQFFHLPMEAKQQYANSPTTYEGYGSRLGVEKGAILDWSDYYFLHYLPVSVKDCNKWPASPQSCREVFDEYGKELVKLSGRLMKALSLNLGLEEKILQNAFGGEEIGACMRVNFYPKCPRPELTLGLSSHSDPGGMTMLLPDDQVAGLQVRKFDNWITVNPARHGFIVNIGDQIQVLSNATYKSVEHRVIVNSDQERLSLAFFYNPRSDIPIEPLKQLITPERPALYPAMTFDEYRLFIRMRGPCGKSQVESMKSSK* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2172 359 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 9 356 - -
Mtr3g2172 359 PRINTS Isopenicillin N synthase signature 73 90 - -
Mtr3g2172 359 PRINTS Isopenicillin N synthase signature 268 294 - -
Mtr3g2172 359 Pfam 2OG-Fe(II) oxygenase superfamily 210 308 IPR044861 -
Mtr3g2172 359 Pfam non-haem dioxygenase in morphine synthesis N-terminal 50 161 IPR026992 -
Mtr3g2172 359 Gene3D - 11 342 IPR027443 -
Mtr3g2172 359 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 356 - -
Mtr3g2172 359 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 207 308 IPR005123 -
Mtr3g2172 359 SUPERFAMILY Clavaminate synthase-like 12 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2172 Mtr-Chr3 35282802 35286644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2172 15 356 Glycosyltransferase AT5G59530 31.232 7.78e-47 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2172 - - gmx:100814471 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2172 3 35282802 35286644 Mtr5g2826 5 36810842 36816205 ECH
Mtr3g2172 3 35282802 35286644 Mtr3g2172 3 35282802 35286644 ECH