Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2818 ATGGGAAATAAGATGGTAACATACAACAAGTACAAAAGAGTCTTGTTCTTTATCAAAAAGTATAAGGTGACTGAGCTGGTTCCACCTGAAGACCTCAGGGAGATTTTTTCTGAGTTTGCCGGAGGTGGATCATACATGTCAACCGAGCAATTACACCGGTTTCTTGTGGAGCATCAAGGCGAGGAGAATTTCACGTTATTGGATACGGAGAAAATTGTTGATAAGATTTTGCAGCTGAGAAGGACACAACAGGAAACGGTTCATGTTGATCAACATAGAGAAAGGAAAATCGCCCTTGATGATATCTTCCGGTTTTTGTTCCTAGATGATTTCAATGGTCCTTCCAAAACTGAGGTAAATCATGATATGAGTGCTCCATTGTCACATTATTTCATATATACAGGACACAATTCCTTCCTTACTGGAAATCAACTAAGCAGTGATTGCAGTGAAGAACCAATCATAAAGGCGCTGCAACAAGGCGTGCGTGTTATAGAACTCGATTTATGGCCAACTTCTAGTAAAGAAGATATTAAAGTTGATCATGGATGGACACTTACAAATCCTGTATCACCTATCAAATGTTTGGAGTCTATAAAGAAATATGGTTTTGTTGCATCTCAATATCCAGTGATCATAACTATAGAAGATCATCTTACAGAAGAACTTCGAGCGAAATTTGCAGAAATGGCAACTCAAATATTTGGAGAAATGCTTTATTATCCTCAACCAGCAGAATGTTTAACTTTAACAGAATTTCCTTCACCGGAATCATTGAAAAATAGAGTTATTATATCAACAAAACCTCCGAAAGAACATTTTAAGTCCAACCGGATCAAGGACAACGGCAACTATCATGCTCTAGATGGAATTAGTGAATCATCAGAAGAAGAATCATCGGGAAAGGAATCGCCAGATTCTACAGTTGAAGTGGAGATTAATAGTGCGAATGGAAGTGATAGCGATGAGGGAGACGCAGGTAAATATGGATGTCATCGAAGATTATTTCAAGAGTGTTCACCGGATTACAAAAGTATAATAACAATCCAAAATAAGAAACTTAAGGGTAGCTTGAAAGATAAATTGAAAACTGACGGTGAACTTAGACGCTTAAGTTGGAGCGAAACAACCTTAGAAAAGGCTTCAGAATCTCATGGAACAGACATCATTAGATTCACACAAAAAAATATACTCAGGGTGTACCCTAGGGCGACACGCGTCAAATCCACAAATTTCAAGCCACATCTTGGGTGGATGTATGGAGCTCAGATGGTTGCATTCAATATGCAGGGGTTAGGAAAATCACTCTGGTTGATGCAAGGAATGTTCAGAGCAAATGGAGGATGTGGTTATGTAAAAAAGCCTGAAATTCTAATGCAGAAACTTCAATGTGACAATGAGTTTGATCCTACAAGGATTATGCCAGTGAAGAAGACATTAAAGGTAAAAATTTACATGGGACATGGTTGGAGCTTAGATTTTAGTCCCACACACTTTGATATGTTCTCTCCCCCAGACTTTTACACAAAGATTGGTATTGTTGGTATCCCTGCTGACATTGCAAGGAAGAAAACAAAAGTAATAATGGACAATTGGTTTCCTGTGTGGAATGAAGAATTTGAATTCCCTTTGACTGTTCCAGAGCTTGCTTTACTTCAGATACAAGTAAGAGACAAAGATCAAGGAGGAAAAGATGACTTTGCTGGACAAACATGTTTGCCAGTTTCAGAGATAAAACTTGGATTTAGATCAATCCCTTTATATAATGAAAAGGGTGAACAATTTAAATCTGTTAAGTTGTTAATGAGGTTTCAATTTGAATGA 1824 0.3772 MGNKMVTYNKYKRVLFFIKKYKVTELVPPEDLREIFSEFAGGGSYMSTEQLHRFLVEHQGEENFTLLDTEKIVDKILQLRRTQQETVHVDQHRERKIALDDIFRFLFLDDFNGPSKTEVNHDMSAPLSHYFIYTGHNSFLTGNQLSSDCSEEPIIKALQQGVRVIELDLWPTSSKEDIKVDHGWTLTNPVSPIKCLESIKKYGFVASQYPVIITIEDHLTEELRAKFAEMATQIFGEMLYYPQPAECLTLTEFPSPESLKNRVIISTKPPKEHFKSNRIKDNGNYHALDGISESSEEESSGKESPDSTVEVEINSANGSDSDEGDAGKYGCHRRLFQECSPDYKSIITIQNKKLKGSLKDKLKTDGELRRLSWSETTLEKASESHGTDIIRFTQKNILRVYPRATRVKSTNFKPHLGWMYGAQMVAFNMQGLGKSLWLMQGMFRANGGCGYVKKPEILMQKLQCDNEFDPTRIMPVKKTLKVKIYMGHGWSLDFSPTHFDMFSPPDFYTKIGIVGIPADIARKKTKVIMDNWFPVWNEEFEFPLTVPELALLQIQVRDKDQGGKDDFAGQTCLPVSEIKLGFRSIPLYNEKGEQFKSVKLLMRFQFE* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2818 607 ProSiteProfiles C2 domain profile. 458 589 IPR000008 -
Mtr5g2818 607 SMART C2_3c 479 587 IPR000008 -
Mtr5g2818 607 SMART plcx_3 121 268 IPR000909 -
Mtr5g2818 607 Pfam C2 domain 480 581 IPR000008 -
Mtr5g2818 607 PRINTS Phospholipase C signature 126 144 IPR001192 GO:0035556
Mtr5g2818 607 PRINTS Phospholipase C signature 152 172 IPR001192 GO:0035556
Mtr5g2818 607 PRINTS Phospholipase C signature 252 269 IPR001192 GO:0035556
Mtr5g2818 607 PRINTS Phospholipase C signature 397 418 IPR001192 GO:0035556
Mtr5g2818 607 PRINTS Phospholipase C signature 418 436 IPR001192 GO:0035556
Mtr5g2818 607 PRINTS Phospholipase C signature 573 583 IPR001192 GO:0035556
Mtr5g2818 607 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 372 458 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Mtr5g2818 607 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 476 606 IPR035892 -
Mtr5g2818 607 SMART plcy_3 343 459 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Mtr5g2818 607 SUPERFAMILY PLC-like phosphodiesterases 121 460 IPR017946 GO:0006629|GO:0008081
Mtr5g2818 607 Pfam Phosphatidylinositol-specific phospholipase C, X domain 123 268 IPR000909 -
Mtr5g2818 607 Gene3D C2 domain 474 607 IPR035892 -
Mtr5g2818 607 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 368 456 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Mtr5g2818 607 MobiDBLite consensus disorder prediction 271 326 - -
Mtr5g2818 607 MobiDBLite consensus disorder prediction 306 321 - -
Mtr5g2818 607 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 121 268 - -
Mtr5g2818 607 MobiDBLite consensus disorder prediction 291 305 - -
Mtr5g2818 607 Gene3D Phosphatidylinositol (PI) phosphodiesterase 118 472 IPR017946 GO:0006629|GO:0008081
Mtr5g2818 607 Gene3D - 24 113 - -
Mtr5g2818 607 CDD C2_PLC_like 477 607 - -
Mtr5g2818 607 SUPERFAMILY EF-hand 4 119 IPR011992 -
Mtr5g2818 607 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 1 607 IPR001192 GO:0035556
Mtr5g2818 607 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 1 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2818 Mtr-Chr5 36704957 36709284 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2818 2 607 Acyl Lipid Metabolism Gene Families AT2G40116 53.418 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2818 K05857 - gmx:100820253 938.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2158 3 35141728 35148118 Mtr5g2818 5 36704957 36709284 PCT