Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2813 ATGGGAAGGTTGTTTGTTGTTCATCTTGAAGGGAGGATGTATAGCTGTAAACACTGTAGAACACCTCTTGCTCTTTGTGAAGATGTTGTATCAAAGGCTTTCCACAGCAGACATGGGAAGGCTTATCTCTTCCGTAAGGTTGTGAATGTTTCTATTGGAGAATTAGAGGATAGAAATATGATGACTGGGATGCATACTGTGGCTGACATTTTCTGTGTCGGTTGTGGATCAATCCTCGGTTGGACATATGAGACTGCTCATGAAAAAAGCCAGAAGTACAAAGAAGGAAAATCTGTTCTCGAACGGTTTAAGGTGTCTGGTCCTGATGGCGGCAATTATTGGGTGAGCCATGCAACACATGGTGTTGGAAGTGATGCAGATGATGCTTAA 390 0.4282 MGRLFVVHLEGRMYSCKHCRTPLALCEDVVSKAFHSRHGKAYLFRKVVNVSIGELEDRNMMTGMHTVADIFCVGCGSILGWTYETAHEKSQKYKEGKSVLERFKVSGPDGGNYWVSHATHGVGSDADDA* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2813 129 PANTHER PROTEIN YIPPEE-LIKE 1 129 - -
Mtr5g2813 129 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 129 IPR039058 -
Mtr5g2813 129 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 14 105 IPR004910 -
Mtr5g2813 129 ProSiteProfiles Yippee domain profile. 12 109 IPR034751 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2813 Mtr-Chr5 36649513 36652654 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2813 - - cit:102609322 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2813 5 36649513 36652654 Mtr5g2813 5 36649513 36652654 ECH
Mtr3g2145 3 35018917 35022055 Mtr5g2813 5 36649513 36652654 PCT