Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2145 ATGATCTCACTTGTGAGTCCACGTTTCTTACAACAACTGCATCGTACCAACAGACACACACACCGATTCATGGGTAGATTGTTTGTGATCAATTTGGAAGGTAAGATTTATTCCTGCAGATACTGTCGCACCCATCTTGCTTTATATGAAGACATCGTTTCCAAGACTTTCCACTCCAGACATGGGAAAGCTTATCTCTTCAATAAGGTCGTGAATGTTTCTCTTGGCGAAACAGAGGAGAGACCGATGATGACTGGGTTACATACTGTAGCTGACATTTTCTGTGTGGGTTGTGGATCGATTGTGGGTTGGAAATATGAGATTGCCCACGAAAAAGACCAAAAGTACAAGGAAGGAAAGTCTGTACTTGAAAGGTACAAGGTATCAGGTCCTGATGGTAGCAATTATCGGATCAACAATGGAGCACATGTTGGCGGAAGCGATGCAGATGATTTATAG 459 0.427 MISLVSPRFLQQLHRTNRHTHRFMGRLFVINLEGKIYSCRYCRTHLALYEDIVSKTFHSRHGKAYLFNKVVNVSLGETEERPMMTGLHTVADIFCVGCGSIVGWKYEIAHEKDQKYKEGKSVLERYKVSGPDGSNYRINNGAHVGGSDADDL* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2145 152 MobiDBLite consensus disorder prediction 130 152 - -
Mtr3g2145 152 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 36 129 IPR004910 -
Mtr3g2145 152 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 24 152 IPR039058 -
Mtr3g2145 152 PANTHER PROTEIN YIPPEE-LIKE 24 152 - -
Mtr3g2145 152 ProSiteProfiles Yippee domain profile. 35 132 IPR034751 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2145 Mtr-Chr3 35018917 35022055 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2145 - - gmx:100305552 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2145 3 35018917 35022055 Mtr3g2145 3 35018917 35022055 ECH
Mtr3g2145 3 35018917 35022055 Mtr5g2813 5 36649513 36652654 PCT