Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2786 ATGGAAGATAACGGAAGAATGAATGTAAGATTATCCGACGTGGTTCTTGACTGTGTGATGCCGTACATCCATGACCCGAAAGACCGAGACGCGGTCTCTCAGGTATGTCGGCGATGGTATGAGATCGATTCACAAACACGAAAGCACGTGACAATTGCTTTATGTTACACAACAACACCAGACAGACTTCGGAGACGGTTTCCTCATCTGGAATCTTTGAAACTGAAAGGGAAACCCAGGGCGGCGATGTTTAACTTAATACCAGAGAATTGGGGAGGTTTTGTGAATCCTTGGGTCAGAGAGATTGAGAATTATTTTGATTGTTTAAAGTCTTTGCACTTTCGGAGAATGATTGTTACAGATGATGATCTTTCCATTCTTGCGCGTTCTAGACATCAAAGTCTTTATTCTCTTAAGCTTGAGAAGTGTTCTGGTTTTTCTACTCATGGACTTTACCATATTTCTCATTCTTGCAAGAATTTAAGAGTCTTGTTCATGGAGGAAAGCTCGGTTCTTGAGAATGATGGAAAATGGCTGCATGAGCTCGCTTCGAATAATACAGTTCTGGAGACACTGAATTTTTACTTGACTGATATTGCCAATATCAGAATTGAGGACCTTGAACTTTTAGCTAAAAACTGCCCAAACCTGGTCTCTGTGAAAATTACGGATTGTGAAATGTTGAATCTGGTGAACTTCTTTCGATATGCATCTTCTCTAGAAGAATTTTGTGGAGGTTCCTACAATGAAGATCCAGAGAAGTATGCTGCTATATCGTTACCGTCAAAGTTAAGTCGACTGGGTTTGACATATATTGGAAAGAATGAAATGCCAATTGCATTCCCTTATGCAAGCCAACTAAAAAAATTGGATCTTCTCTATGCAATGCTGGATACGGAGGATCATTGTACATTAATCGAGAAATGCCCCAACTTAGAAATCCTTGAGTCAAGGAATGTAATTGGAGATAGAGGATTAGAAGTACTTGCTCGCTGTTGTAAGAAGTTGAAAAGGCTAAGGATTGAAAGAGGTGATGATGATCAAGGAATGGAAGATGTGGATGGTGTTGTTTCCCAAAGAGGACTAATTGCCTTATCACTTGGCTGTCCAGAGCTTGAATACATGGCTGTCTATGTATCCGACATCACCAACGAATCTCTTGAGCACATCAGTACTCACTTGAAAAACCTTTGTGATTTTCGACTCGTCTTGCTCGACCGTGAGGAGAAGATAACCGATTTGCCACTTGACAATGGAGTGAGGGCTCTACTGACAGGCTGCAAAAAGCTTAGAAGATTTGCTCTATACCTGAGACCTGGTGGTTTAACCGATGTAGGCCTAGGTTACATAGGAAAATACAGTCCAAACGTGAGATGGATACTTCTCGGTTATGTCGGCGAAACTGATGCAGGGCTCTTGGAATTCTCCAAAGGTTGTCCGAGTCTTCAGAAACTCGAAATGAGAGGGTGTTCATTTTTCAGTGAGCATGCACTAGCTGTTGCTGCAACTAGGTTAACATCTTTGAGGTATCTTTGGGTTCAAGGGTATGGAGCATCAGCTTCTGGGCACGATCTTTTGGCAATGGCACGACCCTATTGGAATATTGAGGTTATTCCTTCCAGACGCATGGTTGTTAATAATCAACAGGATCGGCGGCCTGTTGTTATTGAGCATCCAGCTCATATTCTTGCTTATTACTCCCTTGCTGGACCAAGAGCAGATTGTCCTGATACTGTTAGACCTTTGCATCCTGCTGCAGCAGCAGATGGTGTTGACACGTAA 1782 0.422 MEDNGRMNVRLSDVVLDCVMPYIHDPKDRDAVSQVCRRWYEIDSQTRKHVTIALCYTTTPDRLRRRFPHLESLKLKGKPRAAMFNLIPENWGGFVNPWVREIENYFDCLKSLHFRRMIVTDDDLSILARSRHQSLYSLKLEKCSGFSTHGLYHISHSCKNLRVLFMEESSVLENDGKWLHELASNNTVLETLNFYLTDIANIRIEDLELLAKNCPNLVSVKITDCEMLNLVNFFRYASSLEEFCGGSYNEDPEKYAAISLPSKLSRLGLTYIGKNEMPIAFPYASQLKKLDLLYAMLDTEDHCTLIEKCPNLEILESRNVIGDRGLEVLARCCKKLKRLRIERGDDDQGMEDVDGVVSQRGLIALSLGCPELEYMAVYVSDITNESLEHISTHLKNLCDFRLVLLDREEKITDLPLDNGVRALLTGCKKLRRFALYLRPGGLTDVGLGYIGKYSPNVRWILLGYVGETDAGLLEFSKGCPSLQKLEMRGCSFFSEHALAVAATRLTSLRYLWVQGYGASASGHDLLAMARPYWNIEVIPSRRMVVNNQQDRRPVVIEHPAHILAYYSLAGPRADCPDTVRPLHPAAAADGVDT* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2786 593 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 9 584 - -
Mtr5g2786 593 PANTHER CORONATINE-INSENSITIVE PROTEIN 1 9 584 - -
Mtr5g2786 593 Gene3D - 1 47 - -
Mtr5g2786 593 Pfam F-box 10 49 IPR041567 -
Mtr5g2786 593 Pfam Transport inhibitor response 1 protein domain 68 114 IPR041101 -
Mtr5g2786 593 SUPERFAMILY RNI-like 265 527 - -
Mtr5g2786 593 SMART LRR_CC_2 309 332 IPR006553 -
Mtr5g2786 593 SMART LRR_CC_2 369 393 IPR006553 -
Mtr5g2786 593 SMART LRR_CC_2 479 504 IPR006553 -
Mtr5g2786 593 SMART LRR_CC_2 132 157 IPR006553 -
Mtr5g2786 593 SMART LRR_CC_2 214 233 IPR006553 -
Mtr5g2786 593 SMART LRR_CC_2 427 453 IPR006553 -
Mtr5g2786 593 Gene3D Ribonuclease Inhibitor 48 585 IPR032675 -
Mtr5g2786 593 SUPERFAMILY RNI-like 86 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2786 Mtr-Chr5 36292065 36296943 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2786 K13463 - gmx:100793081 1028.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2786 5 36292065 36296943 Mtr5g2786 5 36292065 36296943 ECH
Mtr3g2133 3 34899840 34903231 Mtr5g2786 5 36292065 36296943 PCT