Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2133 ATGGCGGAAGAAGATCGGAACGTAAGACTTAACGGCAACCGCATCATCGACGTAGTCTTAGACTGTGTAATCCCTTACATAACCGATCCAAAAGACCGGGACGCAGTTTCACAAGTCTGCCGACGATGGCACGAGCTAGATTCCATGACTCGAAAACACGTCACCATCGCTCTCTGTTACACCACAACACCGTGGCGGCTCCGTCGTAGATTTCCACATCTAGAGTCGTTGAAACTGAAAGGAAAACCACGTGCAGCGATGTTTAATTTGATTCCTGAAGATTGGGGAGGTCATGTTACGCCATGGATTAACGAAATTTCTCAGTATTTTGATTGTTTAAAGAATCTTCATTTTCGGAGGATGATTGTTCAAGATTCCGATCTTAATATTCTTGCTGAATCGCGTGGTCATGTTCTTCAGTCTCTTAAGCTTGAGAAATGTTCTGGATTTTCTACAAAAGGTCTTGGATATATTGGTCGCTTTTGCAGGAGTTTAAGAGTTTTGCTTTTGGAGGAAAGCACAATTGTTGAGAATGTTGAGAATGATGAAGAAAATGAGAACGAATGGCTACACGAGCTTGCCATGAATAACACGGTTCTCGAGTCTCTAAATTTTTACTTGACAGATGTTGAAGTCAAAGTTCAGGACCTCGAGCTTTTAGCCAGGAATTGCCCAAACTTGGTGTCTGTAAAGATTACCGATTGTGAAATCTTGGATCTTAGGAATTTTTTCCGCAATGCAACTGCTCTGGAAGAATTCTCTGGTGGCACCTACAACGAGGAACCTGAAAGATACACTGCTTTAATGTTACCGGCAAAGTTATGCCGATTGGGTCTAACATACATTGGAAAGAATGAATTGCCAATAGCGTTTCCGTATGCAGCTGGACTAAAAAAATTGGATCTCCTCTATGCCATGCTAGACACAGAGGATCACTGTATGTTGATCCAAAAGTGCCCAAATTTGGAAGTCCTTGAGACGAGAAATGTAATTGGAGATAGAGGATTAGTGATTCTTGGTCACTGCTGTAAGAAGTTAAAAAGACTTAGGATTGAACGAGGTGATGATGACCAAGGATTGGAGGATGAAGAAGGTACCGTGTCCCACAGAGGATTAATTGCTTTGTCACAAGGGTGTACAGAACTTGAATATTTGGCTGTGTATGTGTCCGATATTACAAATGCATCTCTGGAACATATTGGCACTCACTTGAAGAAACTCTGCGATTTTCGCCTTGTCTTGCTTGATCACGCAGAGAGAATATCAGATTTGCCACTTGACAACGGGGTGCGGGCTTTGCTGATGGGGTGTGACAAGCTTGTTAGATTTGCATTATATCTGCGGCGTGGTGGCTTGACTGATGTTGGTCTTGGTTACATTGGCCAACACAGTCAAAATGTGAGGTGGATGCTGTTAGGGTATGTGGGGGAAACTGATACAGGGCTTTTGGAGTTCTCAAATGGCTGTCCTAGTCTCCAGAAACTTGAAATGAGAGGATGTTCCTTTTTCAGCGAGCATGCGCTTGCAATTGCTGCAACACGATTGACTTCTCTTAGGTACTTGTGGGTTCAAGGGTATGGTGCATCTTCGTCTGGAAGTGGTCTTTTGGCAATGGCTCGCCCTTTTTGGAACATTGAGTTAATTCCTTCTAGGCAAGTTGCTGTCAATAACAATGTCAATCCGGATGAGCCTCAGGTTGTTACGCATCCAGCTCATATTCTTGCATACTACTCTCTTGCTGGCCTGAGATCAGATTTTCCAAATTCTGTTGTACCATTGAACCCTGTTGCGTATGTTGATGCCTAG 1806 0.433 MAEEDRNVRLNGNRIIDVVLDCVIPYITDPKDRDAVSQVCRRWHELDSMTRKHVTIALCYTTTPWRLRRRFPHLESLKLKGKPRAAMFNLIPEDWGGHVTPWINEISQYFDCLKNLHFRRMIVQDSDLNILAESRGHVLQSLKLEKCSGFSTKGLGYIGRFCRSLRVLLLEESTIVENVENDEENENEWLHELAMNNTVLESLNFYLTDVEVKVQDLELLARNCPNLVSVKITDCEILDLRNFFRNATALEEFSGGTYNEEPERYTALMLPAKLCRLGLTYIGKNELPIAFPYAAGLKKLDLLYAMLDTEDHCMLIQKCPNLEVLETRNVIGDRGLVILGHCCKKLKRLRIERGDDDQGLEDEEGTVSHRGLIALSQGCTELEYLAVYVSDITNASLEHIGTHLKKLCDFRLVLLDHAERISDLPLDNGVRALLMGCDKLVRFALYLRRGGLTDVGLGYIGQHSQNVRWMLLGYVGETDTGLLEFSNGCPSLQKLEMRGCSFFSEHALAIAATRLTSLRYLWVQGYGASSSGSGLLAMARPFWNIELIPSRQVAVNNNVNPDEPQVVTHPAHILAYYSLAGLRSDFPNSVVPLNPVAYVDA* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2133 601 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 13 596 - -
Mtr3g2133 601 PANTHER CORONATINE-INSENSITIVE PROTEIN 1 13 596 - -
Mtr3g2133 601 Gene3D - 2 51 - -
Mtr3g2133 601 SUPERFAMILY RNI-like 90 526 - -
Mtr3g2133 601 Pfam Transport inhibitor response 1 protein domain 72 118 IPR041101 -
Mtr3g2133 601 Pfam F-box 14 53 IPR041567 -
Mtr3g2133 601 Gene3D Ribonuclease Inhibitor 52 596 IPR032675 -
Mtr3g2133 601 SMART LRR_CC_2 136 161 IPR006553 -
Mtr3g2133 601 SMART LRR_CC_2 379 403 IPR006553 -
Mtr3g2133 601 SMART LRR_CC_2 319 342 IPR006553 -
Mtr3g2133 601 SMART LRR_CC_2 489 514 IPR006553 -
Mtr3g2133 601 SMART LRR_CC_2 437 463 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2133 Mtr-Chr3 34899840 34903231 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2133 K13463 - gmx:100779171 979.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2133 3 34899840 34903231 Mtr3g2133 3 34899840 34903231 ECH
Mtr3g2133 3 34899840 34903231 Mtr5g2786 5 36292065 36296943 PCT