Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2765 ATGGAGGCTTTATGTAATAAGAGTGAAAATTTTCAAAAGAGAAAAAATGGGTCTTGTAGTTCTACTGGATCGTGTTGTTCAGATTTGACTGAACAAGCAAAAACAGCAAGAGGGTCTTCTTCATTTCCTATTAGGAAGGCAACTATGTCCAAATGCAGCAAATCAGATGAAAAAGAAAATGAACCTGTTTCTCAAGTTGATGATAAAAAAGTTACTAGTATCAGCTCAAAAATTTCTGGATCAGGAGGAGATATGATGAAGGAAAGGTTTGCAAAGTTACTGCTTGGTGAAGATATGTCAGGGTCTGGAAAAGGAGTTAGCACTGCTTTGGCTATCTCAAATGCTATTACTAATCTTTGTGGAACTGTATTTGGACAATTATGGAGACTGGAACCTGTACCTTGTGAAAAGAAAGAAAAGTGGCAGAGAGAAATGGATTGGCTTCTTTGTGTTGGTGATCACATTGTTGAGTTAATGCCTTCTTGGCAAACATATCCAGATGGTAGTAAGCAAGAGGTAATGACTTGCAGACCAAGATCAGACATTTTTATCAATCTTCCAGCTCTGCGTAAACTCGACAATATGCTGCTTGAAATTTTAGATAGTTGCACTGCTATGGAGTTTTGGTATGTTGACCAAGGAATCGTGGCACCAGATGCAGATGGATCAGCCTCTTTTCGCAAAAGAAATCAACGGCAAGAGGAGAAGTGGTGGCTCCCTGTACCCCGTGTTCCCCCTGCCGGTCTCAGTGAGAACTCAAGAAAGAAGTTGAATCACACACGCGAAAGTGCTAGCCAAATACTGAAAGCAGCCATGTCTATCAACAGCATTGCTTTGGATGAAATGGAAGTTCCAGAGTCCTATCTTGATACCCTTCCCAAGAATGGAAGAACGTGCTTGGGAGATTTTATTTATCGATACATCACATCCGACCAGTTCTCTCAAGAGTGCTTGCTTGATTGCATAGACATCTCCAATGAGCATGTTGCACTTGAGATTGCTAACCGTTTAGAAGCCGCAATTTATGTTTGGCGCCGGAGATCTCACTCTAAACCACCACTTTATCCTAGCCGTTCGACTACAAAGTCATCCTGGGACATTGTCAAGGACTTTATGGTTGATGGAGACAAAAGAGAATTGCTTGCAGAGAGAGCTGAAAGTATTCTAATTTCATTGAAGCAGCGTTTCCCGGGTTTAAGTCAAACTACATTGGATACTAGCAAGATCCAATGCAACAAGGATGTTGGAAAATCCATACTAGAAAGCTACTCAAGAGTTTTGGAGAGTATGGCATTTAACATAGTAGCTCGTATAGATGATTTACTATATGTTGATGACTTAACCAAACATTCAGATAGGTTTCCATTGGCTCCAATGGTTAACATGGTTTCACAGAAAAAGGTTTCACAACAGTTACCAGTGTCTGTCTCAGACACTCAACACAAAGCAAAATTTGGAACTCCTAGTTATTCACCTGTGCCACTAATTAGTCCTTCGAAGGGAGAGATAACTCCTTTTATCCACAACAATAACAGCAACATCATTAAACCTCAACGTCGCGGTTTTGGTGTAAAAAGAGTGTTGTCAAATTATCTTGGAGGAGAGATGAAAGCAGCAAAAATATTTAGCAACTCAAGTCATGAGGTGAATAGTTCAAATCCAAGTTGCAAAAGAACAGAACAACTAGAGTGTAAGAATGAATCATGTTCCATGAAAAGCAAGACAAAATGA 1731 0.3992 MEALCNKSENFQKRKNGSCSSTGSCCSDLTEQAKTARGSSSFPIRKATMSKCSKSDEKENEPVSQVDDKKVTSISSKISGSGGDMMKERFAKLLLGEDMSGSGKGVSTALAISNAITNLCGTVFGQLWRLEPVPCEKKEKWQREMDWLLCVGDHIVELMPSWQTYPDGSKQEVMTCRPRSDIFINLPALRKLDNMLLEILDSCTAMEFWYVDQGIVAPDADGSASFRKRNQRQEEKWWLPVPRVPPAGLSENSRKKLNHTRESASQILKAAMSINSIALDEMEVPESYLDTLPKNGRTCLGDFIYRYITSDQFSQECLLDCIDISNEHVALEIANRLEAAIYVWRRRSHSKPPLYPSRSTTKSSWDIVKDFMVDGDKRELLAERAESILISLKQRFPGLSQTTLDTSKIQCNKDVGKSILESYSRVLESMAFNIVARIDDLLYVDDLTKHSDRFPLAPMVNMVSQKKVSQQLPVSVSDTQHKAKFGTPSYSPVPLISPSKGEITPFIHNNNSNIIKPQRRGFGVKRVLSNYLGGEMKAAKIFSNSSHEVNSSNPSCKRTEQLECKNESCSMKSKTK* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2765 576 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 84 449 IPR005512 GO:0005085
Mtr5g2765 576 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5 13 549 - -
Mtr5g2765 576 MobiDBLite consensus disorder prediction 50 66 - -
Mtr5g2765 576 MobiDBLite consensus disorder prediction 49 83 - -
Mtr5g2765 576 MobiDBLite consensus disorder prediction 10 26 - -
Mtr5g2765 576 Gene3D PRONE domain, subdomain 1 75 317 - -
Mtr5g2765 576 Gene3D PRONE domain, subdomain 1 318 454 - -
Mtr5g2765 576 MobiDBLite consensus disorder prediction 1 26 - -
Mtr5g2765 576 MobiDBLite consensus disorder prediction 546 576 - -
Mtr5g2765 576 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 13 549 IPR038937 GO:0005085
Mtr5g2765 576 MobiDBLite consensus disorder prediction 560 576 - -
Mtr5g2765 576 ProSiteProfiles PRONE domain profile. 73 455 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2765 Mtr-Chr5 36059748 36063857 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2765 - - vun:114193182 827.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2111 3 34620879 34625024 Mtr5g2765 5 36059748 36063857 ECH
Mtr5g2765 5 36059748 36063857 Mtr5g2765 5 36059748 36063857 ECH
Mtr3g2111 3 34620879 34625024 Mtr5g2765 5 36059748 36063857 PCT