Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2111 ATGGAAACTTTATCTAAAAATTCTCAAAAGAAAAAAGATGGGTCTCGTTCTTCTTGTGTTACTGATTCAAGTGTAGAGTCTAGAACTACAAGTTTCAGTGGATCTAATTCAACCTCGTCAATTTCTACTTCAGAAGTTGAAGCTAAATCAAATGGTACTCCTCTTGGTTGGCCTATTCTAAAAGCTACACTTTCCAGCTCAAAGCGTTCATGTTCTTCTGATGACAAAGAAAACAAACACAAATCGAACATGGAAGTGGAACACACAAAATGTACAACTATGGATGTAAAAGTCTCAGATGTTGATATGATGAAGGAAAGGTTTGCAAAATTGTTGCTTGGTGAAGATATGTCAGGTTCAGGAAAAGGGGTTTGCACTGCTTTGGCAATCTCTAATGCCATTACTAATCTTTGTGCTACTGCATTTGGGCAACTTTGGAGACTAGAACCACTACCTTGTGAGAAGAAAAAAATGTGGCAAAGAGAGATGGAATGGCTTGTTAGTGTTAGTGATCACATTGTTGAATTAATACCTTCTTGGCAAACATTTCCTGATGGAAAGAAACTTGAGGTAATGACTTGCAGGCCCAGGACAGATATTTGCATCAATCTTCCAGCCCTTCGCAAACTCGATAACATGCTACTTGAAATATTAGACAGTTTCACAGCTACAGAATTTTGGTATGTTGATCAAGGAATTGTAGCCGCTGATTCAGAAGGTTCGGCCTCTTTTCGCAAGTCAATTCAGCGGCAAGAAGAGAAGTGGTGGCTCCCTGTTCCCCGTGTACCCGAAGCAGGTCTTGGTGAGAAGTCAAGAAAGAAGTTGAATCACTCTAGAGAAAGTGCAAGTCAAATTCTCAAAGCAGCTATGTCTATCAACAGCATTGCTTTGGCTGAAATGGAAGTTCCTGAGTCATATTTGGAAACCCTCCCTAAGAATGGAAGAACTTGCCTCGGAGATTTTATTTACCGATACATCACATCAGATCAATTCTCCTCAGAGTGCCTACTTGATTGTTTAGACCTCTCTTCTGAACATATTGCACTCGAGATTGCGAACCGCGTGGAAGCTGCTATTTATCTATGGCGTCGAAGATCTAACCACAGATCAACGCCTAATCCCAACCGTTCAACTACAAAGTCTTCATGGGGGATGGTTAAGGACTTCATGCTTGATGGGGATAAGAGAGAATTGCTAGCACATAGAGCTGAAAACATTCTAAGTTCCTTGAAGCATCGGTTCCCTGGCTTAACTCAAACTACCTTGGATACCAGCAAGATCCAATGCAACAAGGATGTTGGAAAATCTATTCTAGAAAGCTACTCTAGAGTTTTGGAGAGCATGGCTTATAACATTATATCACGCATCGATGATTTGTTATACGTCGATGAGTTGACAAAACATTCAGATAGATTTGCATTGGTTCCTACAACGGGTAATATGGTTTCTCAGCAGATTTTGCGTCCATTTTCAGTGTCTGTCTCAGGCACTCCACACAAAGCAGCATTCGGCACACCTAAGTTTTCGCCTTCTGTGCCATTGATTAGTCCTGTAAGAGGGGAGAGAACTCCTTTCCTCCACAACAATAACAATAACAATGTCAACAACGTCAACAACATCAAACCTCAGCGTCGCGGCTTTGGTGTGAGAAGAGCTTTGTCAAATTATCTTGGTGTTGAGACTAAAACAAAGACATGTGCCAATACAACTGAGGTCAATGGTTCAAACCCAAGTAGCAAGAAAACAGAACAACCTCAAAAGGAAACATGTGCTGTGAAATTCGGTTGA 1788 0.4094 METLSKNSQKKKDGSRSSCVTDSSVESRTTSFSGSNSTSSISTSEVEAKSNGTPLGWPILKATLSSSKRSCSSDDKENKHKSNMEVEHTKCTTMDVKVSDVDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATAFGQLWRLEPLPCEKKKMWQREMEWLVSVSDHIVELIPSWQTFPDGKKLEVMTCRPRTDICINLPALRKLDNMLLEILDSFTATEFWYVDQGIVAADSEGSASFRKSIQRQEEKWWLPVPRVPEAGLGEKSRKKLNHSRESASQILKAAMSINSIALAEMEVPESYLETLPKNGRTCLGDFIYRYITSDQFSSECLLDCLDLSSEHIALEIANRVEAAIYLWRRRSNHRSTPNPNRSTTKSSWGMVKDFMLDGDKRELLAHRAENILSSLKHRFPGLTQTTLDTSKIQCNKDVGKSILESYSRVLESMAYNIISRIDDLLYVDELTKHSDRFALVPTTGNMVSQQILRPFSVSVSGTPHKAAFGTPKFSPSVPLISPVRGERTPFLHNNNNNNVNNVNNIKPQRRGFGVRRALSNYLGVETKTKTCANTTEVNGSNPSSKKTEQPQKETCAVKFG* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2111 595 MobiDBLite consensus disorder prediction 18 50 - -
Mtr3g2111 595 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 99 467 IPR005512 GO:0005085
Mtr3g2111 595 ProSiteProfiles PRONE domain profile. 91 473 IPR005512 GO:0005085
Mtr3g2111 595 Gene3D PRONE domain, subdomain 1 92 333 - -
Mtr3g2111 595 Gene3D PRONE domain, subdomain 1 334 473 - -
Mtr3g2111 595 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 10 570 IPR038937 GO:0005085
Mtr3g2111 595 MobiDBLite consensus disorder prediction 1 53 - -
Mtr3g2111 595 MobiDBLite consensus disorder prediction 1 17 - -
Mtr3g2111 595 MobiDBLite consensus disorder prediction 568 595 - -
Mtr3g2111 595 MobiDBLite consensus disorder prediction 568 585 - -
Mtr3g2111 595 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5 10 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2111 Mtr-Chr3 34620879 34625024 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2111 - - gmx:100796692 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2111 3 34620879 34625024 Mtr5g2765 5 36059748 36063857 ECH
Mtr3g2111 3 34620879 34625024 Mtr3g2111 3 34620879 34625024 ECH
Mtr3g2111 3 34620879 34625024 Mtr5g2765 5 36059748 36063857 PCT