Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2738 ATGGCACATGCGAAGTTGCAAATGCAAACTGATATCAATGCAATGGAAGAGGAAGCTGGGCAGTGTGGTGTTGGATACCTTAGCAGAACTAGTGTGGCATGCATGATCAATGCAGAAATTGGTGCTGTTTTGGCGGTCATGCGAAGAAATGTTAGATGGGGTGTTCATTATATGTCGGATGATGATCAATTGGAGCATTCCCTTGTTCAATCTTTAAAGGCATTAAGGAGGGAAATTTTTTCTTGGCAGAGTCAGTGGCATGTCATAAACCCCGTCTTGTATCTCCAGCCTTTTCTGGATGTGATTCAATCTGATGAAACTGGTGCACCAATTACTGGTGTTGCTCTGTCGTCTGTTTACAAGATTTTAACTTTGGATGTAATTGATCAAAACACTGTCAATGTTGGGGATTCCATGCACTTGGTAGTCGAGGCTGTTACAAGTTGCAGATTTGAGGTGACGGATCCAGGATCCGAAGAAGTGGTGTTGATGAAGATACTGCAAGTTCTTCTTGCATGTGTAAAAAGTAAAGCATCTGTGATGCTAAGTAACCAACATATATGCACCATAGTAAACACTTGTTTCCGTATAGTTCATCAGGCGGGAACCAAAAGTGAGTTATTGCAGAGGATAGCGCGCTACACTATGCATGAACTTGTCCGCACAATTTTCTCTCACCTCCAAGACATTGATGTCACAGAGCATGCTTTGGTAAATGGAAGCACCGCTTTAAAGGAAGAGATTGATGGGCAAAACATTGAGCATAATTCTATGCACAATCAATTGGAAAATGGTAGTTTGATTTCAGCAAGTGATAGTCAATCTGTATCCACAGACATTGCTTCCAATACTGTTAGTGATGTAGCAGCAGTTATAGTGGATGCAAACACAGCTACGAGCAGTGGCAAGGAGACTGATCTTAATAAACAGCTCATGAATGAACCGCATGGGATTCCCTGCATGCTGGAAATATTTCGCTTCTTATGTTCACTGTTGAATGTTGGTGAGCATATGGGAATGAGTCCTCGATCTAACACAATAGCATTTGATGAAGACGTTCCCCTTTTTGCTTTAACGTTGATTAATTCAGCCATAGAGTTGGGAGGTTCTTCCTTTCACCTACACCCTAGATTGTTGAGCTTAATTCAGGATGAATTATTCTGCAATCTTATGCAATTTGGTTTGTCAATGAGTCCCCTTGTACTTTCTATGGTAAGTAGCATTGTTTTAAATTTGTATCACCATCTTCGTACAGAAATCAAGTTCCAGCTAGAAGCATTTTTTTCTTGTGTAATTTTGAGACTTGCACAAAGCAAATACGGGGCTTCATATCAACAGCAGGAAGTAGCCATGGAGGCACTTGTTGACTTCTGCAGGCAAAAAGCATTCGTGGTGGAGATGTATGCTAACTTTGACTGTGACATAACTTGCAGTAATATCTTTGAAGATATTGCTAATTTGTTATCCAAGAGTGCATTTCCTGTGAACAGTCCATTATCTTCCATGAATATTCTTGCTTTGGATGGTCTTATTGCTGTCATACAAGGAATGGCTGAAAGGATAGGTAACGGATCTTTGAGTTCAGAACATTCTGTTGTGAATCTTGAAGAGTATACTCCATTTTGGCTTGAAAAGTGTGAAAATTTCAATGATCCAAATGATTGGGTTCCTTTTGTTGGTCGAAGAAAGCACTTCAAGAAAAGATTGATGATTGGCGCCGATCATTTTAATCGTGATACTAAGAAAGGTCTTCAGTTTCTTCAAGGAACACATCTTTTGCCTGACAAGCTTGATCCCCAAAGTGTTGCCTTCTTTTTCAAATACACTACTGGGTTGGATAAGAATCTTATTGGGGATTACCTTGGAAACCATGATGAGTTCTGTGTTCAGGTTCTTCAGGAATTTGCTAGGACATTTGATTTTAATGACATGGCATTAGATACAGCCCTGCGAATATTTTTGGAGACTTTCAGATTGCCTGGAGAATCACAGAAGATCCAGAGGGTGCTTGAAGCATTTTCTGAGAGATATTATGAGCAGTCACCGCATATCCTAGCTAACAAGGATGCTGCTCTTTTGTTATCATATTCAATTATAATGCTTAATACAGACCAGCACAATTCACAGGTCAAAAAGAAGATGACAGAAGAAGATTTTGTCCGAAACAATAGGCGAATAAATGGTGGCAATGATCTACCTCGGGAAGTCCTGTCCGAACTATATCATTCAATTTGTAAAAATGAGATCCGTACAACTCCTGAGCAAGGTTCTGCTTTTCCCGAAATGACCCCGAGTCGTTGGATTTATCTCATACACAAGTCAAAAAACACAGCTCCCTTCATTGTTTCTGATTGCAGAGCACACCTTGATTATGATATGTTCTCCATTATGTCTGGTCCAACAGTTGCAGCCATTTCTGTGGTATTTGATAATGCTGAAACTGAAGAGGTGTACCAAACATGCATGGACGGATTCTTAGCTGTTGCAAAGGTATCAGCTTATTATCATCTTGAAAGTATACTAGATGATTTGGTTGTGTCACTTTGCAAGTTTGTTACTATTTTGGATCCGTTATCTCCCGAGGAGTCAATCTTAGCCTTTGGAGAGGACACAAAAGCAAGAATGGCAACTGAGACTGTTTTCACTATTGCCAATAGGTATGGTGATTACATTCGTACAGGGTGGAGGAATATTCTTGATTGCATCTTAAAATTTCACAAGTTAGGTCTTCTTCCTGCTCAAATGGCCAATGATGCGGCCGAAGAGTCAGAGCCTTCCACAGAAACTGGGAATGGGAAGCGTTATGCTAACTCTTTATCTTCATCTCAGCTTTTATCTGTTAATACTCCAAAGAGATCGTCGGGATTTATCAGCAGGTTTAGTCAACTCTTATACCTTGGTGCTGAAGAGACAAGATCAGAACCATCAGAAGAACAACTTGCTGCTCAGCAGTGTTCCCTTCAGACAATTCAGAAGTGTCACATTGAGAGCATATTTACTGAGAGTAAATTTTTGCAAGCTGAATCTCTATTGCACCTTGTTAAAGCACTCAAAAGCGCAGGAGTGAGACCTAAGAAAGGGAATGGCACATCTGAGGATGAAGATACTTCAGTCTTCTGCCTGGAGTTACTTGTAGCAATCACTCTGAATAATCGAGATAGAATTGAACTTCTTTGGCAGGATGTTTATGAGCATATTTCCAATATTGTGCAGTCCACTGTGATGCCTTGTACACAGGTAGAGAAGGCTGTTTTTGGACTCTTGAGGATTTGCCATCGCTTACTTCCCTACAAAGAGAACATGACCGATGAACTTTTGAGGTCCCTGCAACTTGTCCTGAAGCTTGATGCCCGTGTTGCTGATACATACTATGAGCAGATTACACAGGAAGTTAGTAACCTTGTGAAAGCAAATGCTTCTCATATCAGATCTCAGTTAGGATGGCGGACGATAACATCACTGCTTTCTATTACTGCTAGACACTTGGAATCATCTGAGGCTGGATTTGATGCATTGTTTTTCATTATGTCAGATGGAGCCCACATACTTCCATCTAATTTTGCTCTCTGTGTAGATGCTGCAAAGCAATTTGCCGAATCTCGTGTTGGACAGGTTGAGCGGTCTGTAGTGGCACTTGATCTAATGGCAGGGTCTATCAATTGTTTTGAGAAGTGGGCAAACGATGCTAAGCAAGCAACGACAGAAGAAATGGCAAAGATGTTGCAGAATATTGAGGACATGTGGTTGAGGCTCGTACAGGGACTAAAAAAACTATGTATGGACCAGAGAGAAGAGGTTCGAAACCACGCGTTGTTATCATTGCAGAATTGCTTAACAGCATCAGTTGGAATTCATCTCCCACATGACTTGTGGTTACAATGTTTTGACCAAGTAATCTTCACCGTGCTGGATGACCTGCTTGAAAGTTCTCAGACGCACTCTCCAAAGGACTACCGGAACATGGAAGGAACACTTATTCTTGCCTTGAAGCTCCTGTCTAAAGTTTTCCTCTTGTTACTCCAAGACCTATCACAATCTACAGACTTCAGCAAATTGTGGTTGAATGTTTTGAATCGTTTTGAAATATTTATGAAGGTCAAAATTAGGGGAAGGAGAAGCGAGAAGTTTCAAGAGCTTGTCCCTGAGCTTATGAAGAACACTTTGCTTGTTATGAAAGCAAGCCATGTACTAGAGCAAAGCAGTAGTAGTGGTGATGAAAAAAGTTTATGGGAACTGACGTGGGTACATATAAATAATATTGCCCCATCATTACAATCCGAGGTGTTCCCCGAGCAAGAGGCTAAGCAATTGGAGCAGGAAAAGGCTGAACAAGTTGGAGATAGAGGGCCGGCTGAAAATGTTTCTGCACCTTCTAGGGCTGGAAATGAGTTGAGTTGA 4398 0.4095 MAHAKLQMQTDINAMEEEAGQCGVGYLSRTSVACMINAEIGAVLAVMRRNVRWGVHYMSDDDQLEHSLVQSLKALRREIFSWQSQWHVINPVLYLQPFLDVIQSDETGAPITGVALSSVYKILTLDVIDQNTVNVGDSMHLVVEAVTSCRFEVTDPGSEEVVLMKILQVLLACVKSKASVMLSNQHICTIVNTCFRIVHQAGTKSELLQRIARYTMHELVRTIFSHLQDIDVTEHALVNGSTALKEEIDGQNIEHNSMHNQLENGSLISASDSQSVSTDIASNTVSDVAAVIVDANTATSSGKETDLNKQLMNEPHGIPCMLEIFRFLCSLLNVGEHMGMSPRSNTIAFDEDVPLFALTLINSAIELGGSSFHLHPRLLSLIQDELFCNLMQFGLSMSPLVLSMVSSIVLNLYHHLRTEIKFQLEAFFSCVILRLAQSKYGASYQQQEVAMEALVDFCRQKAFVVEMYANFDCDITCSNIFEDIANLLSKSAFPVNSPLSSMNILALDGLIAVIQGMAERIGNGSLSSEHSVVNLEEYTPFWLEKCENFNDPNDWVPFVGRRKHFKKRLMIGADHFNRDTKKGLQFLQGTHLLPDKLDPQSVAFFFKYTTGLDKNLIGDYLGNHDEFCVQVLQEFARTFDFNDMALDTALRIFLETFRLPGESQKIQRVLEAFSERYYEQSPHILANKDAALLLSYSIIMLNTDQHNSQVKKKMTEEDFVRNNRRINGGNDLPREVLSELYHSICKNEIRTTPEQGSAFPEMTPSRWIYLIHKSKNTAPFIVSDCRAHLDYDMFSIMSGPTVAAISVVFDNAETEEVYQTCMDGFLAVAKVSAYYHLESILDDLVVSLCKFVTILDPLSPEESILAFGEDTKARMATETVFTIANRYGDYIRTGWRNILDCILKFHKLGLLPAQMANDAAEESEPSTETGNGKRYANSLSSSQLLSVNTPKRSSGFISRFSQLLYLGAEETRSEPSEEQLAAQQCSLQTIQKCHIESIFTESKFLQAESLLHLVKALKSAGVRPKKGNGTSEDEDTSVFCLELLVAITLNNRDRIELLWQDVYEHISNIVQSTVMPCTQVEKAVFGLLRICHRLLPYKENMTDELLRSLQLVLKLDARVADTYYEQITQEVSNLVKANASHIRSQLGWRTITSLLSITARHLESSEAGFDALFFIMSDGAHILPSNFALCVDAAKQFAESRVGQVERSVVALDLMAGSINCFEKWANDAKQATTEEMAKMLQNIEDMWLRLVQGLKKLCMDQREEVRNHALLSLQNCLTASVGIHLPHDLWLQCFDQVIFTVLDDLLESSQTHSPKDYRNMEGTLILALKLLSKVFLLLLQDLSQSTDFSKLWLNVLNRFEIFMKVKIRGRRSEKFQELVPELMKNTLLVMKASHVLEQSSSSGDEKSLWELTWVHINNIAPSLQSEVFPEQEAKQLEQEKAEQVGDRGPAENVSAPSRAGNELS* 1466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2738 1465 SUPERFAMILY ARM repeat 350 1343 IPR016024 -
Mtr5g2738 1465 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 319 480 IPR032691 -
Mtr5g2738 1465 ProSiteProfiles SEC7 domain profile. 558 747 IPR000904 GO:0005085|GO:0032012
Mtr5g2738 1465 MobiDBLite consensus disorder prediction 1433 1447 - -
Mtr5g2738 1465 Gene3D - 642 759 IPR023394 -
Mtr5g2738 1465 Gene3D - 559 641 - -
Mtr5g2738 1465 PANTHER PATTERN FORMATION PROTEIN GNOM PROTEIN 11 1457 - -
Mtr5g2738 1465 SMART sec7_5 562 749 IPR000904 GO:0005085|GO:0032012
Mtr5g2738 1465 Pfam Sec7 domain 566 749 IPR000904 GO:0005085|GO:0032012
Mtr5g2738 1465 SUPERFAMILY Sec7 domain 562 755 IPR035999 GO:0005085|GO:0032012
Mtr5g2738 1465 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11 1457 - -
Mtr5g2738 1465 CDD Sec7 566 749 IPR000904 GO:0005085|GO:0032012
Mtr5g2738 1465 MobiDBLite consensus disorder prediction 1431 1465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2738 Mtr-Chr5 35708258 35717701 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2738 K18443 - gmx:100784083 2400.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2738 5 35708258 35717701 Mtr3g2080 3 34254612 34261290 PCT