Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2080 ATGGGACATCTAAACATGCAAATGCCAGCTGGTGTCAATGGAATAGAGGATCAATCTCAGCAATTTGGTGCTGGATATCCTAACAAAACTACGATAGCATGCATGATCAATGCAGAAATTGGTTCTGTTTTGGCAGTTATGCGAAGAAATGTTAGATGGGGGGTTCATTATATGTCAGATGATGACCAATCAGAGCACTTCCTCGTTCAGTCTTTGAAGACACTGAGAAGACAGATTTTCTCATGGCAGAATCAATGGCATTCCATCAATCCTGCCTTGTATCTCCAACCTTTTCTTGATGTGATTCAATCAGATGAAACCGGTGCACCAATTACAGGTGTTGCTCTGTCGTCAGTTTACAAGATCTTAACTCTGGACGTGATTGATCAAAACACTGTCAATGTTGTCGATACCATGGACTTGGTGGTTGATGCTGTCACAAGTTGCAGATTTGAGGTGACTGATCCTGGATCAGAAGAAGTCGTATTAATGAAGATTTTACAAGTACTTCTAGCATGTGTCAAAAGCAAAGCATCTGTAATACTTAGTAACCAACACATTTGTACCATAGTGAATACCTGCTTCCGTATAGTTCATCAAGCAGGAACTAAAGGTGAGCTGTTGCAGCGGATAGCTCGATATACAATGCATGAACTTGTTAGGTGTATATTCTCCCACCTTCAAGAGATTGACATTGCAGAGCCCGCGTTGATAAATGGGAGCACCACTTCAAAACAAGAGACCCGTGAGCTAAATAACGAGCATGCTTCGGAAAGCAGACAATTTGAAAATGGGAGCCTGAACTCTGCATATGATGGCCAACCTTCGTCCACAGGCCTTGCTTCCAGTACTGCATATGTTGGTACAGTAACTGTAATGCCTGAAAACACAACTACTGCTAGCAGTGATAAGGAGAACGATATAAGAGAGTTGCAGCTCATGACTGAACCATATGGAGTTCCTTGTATGGTGGAGATATTCCACTTCTTGTGTTCTTTGTTGAATGTTGTTGAGCATATGGGGATGAATCCTAGATCAAACACACTAACATTTGATGAAGATGTGCCTCTTTTTGCCTTAACTTTGATTAATTCAGCCATTGAGTTGGGAGGGCCTTCCTTTCGTCATCACCCTAGATTACTGAGTTTGATTCAAGATGAAGTATTCCATATTCTTATGCAATTTGGTTTGTCAATGAGTCCCCTTGTACTTTCTTTGGTGTGTAGCATTGTTCTCAATTTGTATCACCATCTTCGTACAGAACTCAAGTTACAGCTAGAAGCATTTTTTTCTTGTGTGATTTTGAGGCTTGCACAAAGCAAATATGGGGCTTCATATCAGCAACAGGAGGTTTTGATGGAGGCACTTGTTGATTTGTGCAGGCAAAAGACATTCATGGTGGAGATGTATGTTAACTTTGATTGTGACATTTCTTGCAGTAATGTCTTTGAAGATATTGCTAATTTGTTGTCCAAAAGTGCTTTTCCTGTAAATAATCCATTATCTTCCATGCATATTCTTGCTTTGGATGGTCTTATTGCTGTAATGCAGGGAATGGCCGATAGGATAGGTAATGGATTTGTCAATTCTGAACATTCTCCTGTGAATTTTGAAGAGTACATACCGTTCTGGCTGGAGCATTGTGAAAATTTTGGTGACCCAAATGATTGGGTTCCTTTTGTCCGCCGAAGAAAGTACTTCAAGCGAAGATTGATGATTGGAGCTGATCACTTCAATCATGATGCTAAGAAAGGCCTTGAGTTTCTCCAAGGAGCACATCTTTTGCCCGACAAACGTGATCCCCAAAGTGTTGCCTGCTTTTTCAGATTCACCGCTGGATTGGATAAGAATGTCATTGGTGATTTCTTAGGAAATCATGATGAATTCTGTGTTCAGGTTCTTCGTGAATTTGCTAGAACGTTTGATTTCCAAGATATGACCTTAGACACAGCCCTGCGCATATTTCTGGAGACTTTTAGGCTGCCTGGAGAATCACAGAAGATACATAGGGTGCTTGAAGCTTTCTCTGAGAGATATTATGAACAGTCACCGCATATCCTAGCTAATAAGGATGCTGCTCTTGTGTTGTCATACTCAATTATAATGCTTAATACGGATCAGCACAATGTGCAGGTCAAAAAGAAGATGACAGAAACAGATTTTATCCGGAATAATAGACACATAAATGGCGGCAACGATCTACCTCGAGAATTCCTGTCAGAGATCTACCATTCAATTTGTAAGAATGAAATCCGCACAACCCCTGAATCAGGCTTTGGATCTCCTGGAATGACCCCAAGTCGGTGGATTTCTCTAATACACAAGTCAAAAACAACTGCTCCATACATCGTATCTGATTCCAGAGCATACCTAGATTATGATATGTTTGTTATATTGTCAGGCCCAACAATTGCTGCCGTTTCTGTGGTATTTGATAATGCTGAAAACGAAGAGGTATACCAAACATGTATAGATGGATTCTTAGCTATTGCAAAGATATCTGCTTACTATCATCTTGAAAATGTTCTTGATGATCTGATTGTCTGCCTCTGTAAGTTCTTCACCATTTTGGATCCATTATCAGTTGAGGAATCTGTCCTAGCCTTTGGTGATGACACAAAAGCACGAATGGTAACTGAGACTGTTTTCACTATTGCAAGTAGGTATGGTGATTACATCCGCACTGGGTGGAGGAATATTCTTGATTGTATCTTCAGATTGCACAACTTAGGCCTTCTTCCCACTCATTTGGCCAGTGATGCAGTTGATGAGTCAGAGCCTTCTACAAAAACTGGACGTGGGAAACTTAATTCAAATTCTTTCTCATCAACTCATCTTCAATCTATTAGTACTCCAAAGAGATCCTCGGGGTTATTGAGCAGGTTTAGTCAACTGTTATCTCTTGCCACTGATGAGCCAAGAGCAATACCAACCGAAGAACAACTGGCCGCTCATCATCAAGCCGTACAAACAATTCAAAAGTGTCACATCGACAGCATATTCACTGAAAGTAAATTCTTGCAGGCTGAATCCCTATTGCAGTTGGTAAGATCACTCATCAATGCTGGAGCTCAATCTCAGAAGGGGAGCAAAAAATCTCAGAATGAAGACACTTCTGTTTTCTGCCTGGAGTTGCTGGTAGCAATCACTCTGAATAACAGGGACAGGATTGGGCTTATATGGAAGGGTGTTTATGAGCACATATCCAATATTGTTAAATCAACCGTGATGCCATGTGCACTGGTAGAAAAGGCTGTTTTTGGACTTCTGAGGATTTGCCATCGCTTACTTCCTTATAAAGAGAACATGGCCGATGAACTTTTAAAGTCCCTGCAACTTATCTTGAAGCTTGATGCACTGGTCGCAGATGTATATTATGATCAGATTACACAGGAAGTCAGTCGCCTTGTTAAGGCGAATGCATCTCGTATTAGATCTCATATAGGATGGCGGACGATCACATCGCTGCTTTCCGTCACTGCTAGACACTTGGAAGCATCTGAGGTTGGATTTGATACGCTGTCGTTCATTATGTCTGATGGAAATTACTTGCTCCCTGCTAATTATATTCTCTGCATAGATGCCGCAAGGCAGTTTGCCGAGTCTCGTGTAGGACTGGTGGATAGGTCCATAGGTTCACTAGACCTTATGGTAGGTTCTTTCAACTGTTTGCAAAAGTGGACTAGTGATGCAAAGCAAGCAGCAAAAGAAGAGGAAGTGGCCAAGATGTTGCAAGATATTGGGGAAATGTGGTTGAGGTTAGTACAAGGACTAAGGAAAGTATGCTTGGACCAAAGAGAGGAGGTTAGAAATCACGCACTGTTATCTTTGCAGAAGTGCATGACAGAAGCTGGCAAGACTCATCTCCCAGGTGATTTGTGGTTACAGTGTTTCGATCAAGTGATCTTCACCTTGCTGGATGACCTGCTTGATATTTCTCAGGAACGCTCTCAAAAGGATTACCGGAACATAGAAGAAACACTTACTCTTGCCTTGAAGCTCTTATTTAAAGTTTTTCTCCTATTACTCCAAGAACTATCACAACTGGAAGAAGCCTTCTGCAAACTATGGGTGGGTGTGCTAAGTCATGCGGAAAAATACATGAAGGTGAAAGTTAGGGGAAAGAGAAGTGAAATGCTTCAATTGCCTGTTCCTGAGCTTCTGAAGAACGCATTGGTTGTTATGAAATCAGGGGGCATACTAGTGGAGAGCAGTGGTTTAGCTGAAAGTAATTTGTGGGAACTGACATGGCTACATATGAAGAATATAGCTCCCTCATTGCAGTCTGAGGTTTTCCAAGAGCATGATGCAGAACAGTTGCAGCAAAAGCAGATTGAAACAGTTGGAGATTTGGAAAGTGATGCCAAAATTTCTGTTCCTTCAAATGAAACACTTGGCCAAGATGGTGCCGGTATTGGTTAA 4422 0.4138 MGHLNMQMPAGVNGIEDQSQQFGAGYPNKTTIACMINAEIGSVLAVMRRNVRWGVHYMSDDDQSEHFLVQSLKTLRRQIFSWQNQWHSINPALYLQPFLDVIQSDETGAPITGVALSSVYKILTLDVIDQNTVNVVDTMDLVVDAVTSCRFEVTDPGSEEVVLMKILQVLLACVKSKASVILSNQHICTIVNTCFRIVHQAGTKGELLQRIARYTMHELVRCIFSHLQEIDIAEPALINGSTTSKQETRELNNEHASESRQFENGSLNSAYDGQPSSTGLASSTAYVGTVTVMPENTTTASSDKENDIRELQLMTEPYGVPCMVEIFHFLCSLLNVVEHMGMNPRSNTLTFDEDVPLFALTLINSAIELGGPSFRHHPRLLSLIQDEVFHILMQFGLSMSPLVLSLVCSIVLNLYHHLRTELKLQLEAFFSCVILRLAQSKYGASYQQQEVLMEALVDLCRQKTFMVEMYVNFDCDISCSNVFEDIANLLSKSAFPVNNPLSSMHILALDGLIAVMQGMADRIGNGFVNSEHSPVNFEEYIPFWLEHCENFGDPNDWVPFVRRRKYFKRRLMIGADHFNHDAKKGLEFLQGAHLLPDKRDPQSVACFFRFTAGLDKNVIGDFLGNHDEFCVQVLREFARTFDFQDMTLDTALRIFLETFRLPGESQKIHRVLEAFSERYYEQSPHILANKDAALVLSYSIIMLNTDQHNVQVKKKMTETDFIRNNRHINGGNDLPREFLSEIYHSICKNEIRTTPESGFGSPGMTPSRWISLIHKSKTTAPYIVSDSRAYLDYDMFVILSGPTIAAVSVVFDNAENEEVYQTCIDGFLAIAKISAYYHLENVLDDLIVCLCKFFTILDPLSVEESVLAFGDDTKARMVTETVFTIASRYGDYIRTGWRNILDCIFRLHNLGLLPTHLASDAVDESEPSTKTGRGKLNSNSFSSTHLQSISTPKRSSGLLSRFSQLLSLATDEPRAIPTEEQLAAHHQAVQTIQKCHIDSIFTESKFLQAESLLQLVRSLINAGAQSQKGSKKSQNEDTSVFCLELLVAITLNNRDRIGLIWKGVYEHISNIVKSTVMPCALVEKAVFGLLRICHRLLPYKENMADELLKSLQLILKLDALVADVYYDQITQEVSRLVKANASRIRSHIGWRTITSLLSVTARHLEASEVGFDTLSFIMSDGNYLLPANYILCIDAARQFAESRVGLVDRSIGSLDLMVGSFNCLQKWTSDAKQAAKEEEVAKMLQDIGEMWLRLVQGLRKVCLDQREEVRNHALLSLQKCMTEAGKTHLPGDLWLQCFDQVIFTLLDDLLDISQERSQKDYRNIEETLTLALKLLFKVFLLLLQELSQLEEAFCKLWVGVLSHAEKYMKVKVRGKRSEMLQLPVPELLKNALVVMKSGGILVESSGLAESNLWELTWLHMKNIAPSLQSEVFQEHDAEQLQQKQIETVGDLESDAKISVPSNETLGQDGAGIG* 1474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2080 1473 Pfam Sec7 domain 568 751 IPR000904 GO:0005085|GO:0032012
Mtr3g2080 1473 MobiDBLite consensus disorder prediction 923 952 - -
Mtr3g2080 1473 CDD Sec7 568 751 IPR000904 GO:0005085|GO:0032012
Mtr3g2080 1473 MobiDBLite consensus disorder prediction 241 276 - -
Mtr3g2080 1473 SMART sec7_5 564 751 IPR000904 GO:0005085|GO:0032012
Mtr3g2080 1473 Gene3D - 644 759 IPR023394 -
Mtr3g2080 1473 PANTHER PATTERN FORMATION PROTEIN GNOM PROTEIN 11 1464 - -
Mtr3g2080 1473 SUPERFAMILY ARM repeat 75 1321 IPR016024 -
Mtr3g2080 1473 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 321 482 IPR032691 -
Mtr3g2080 1473 Gene3D - 561 643 - -
Mtr3g2080 1473 ProSiteProfiles SEC7 domain profile. 560 749 IPR000904 GO:0005085|GO:0032012
Mtr3g2080 1473 MobiDBLite consensus disorder prediction 258 276 - -
Mtr3g2080 1473 MobiDBLite consensus disorder prediction 931 952 - -
Mtr3g2080 1473 SUPERFAMILY Sec7 domain 565 753 IPR035999 GO:0005085|GO:0032012
Mtr3g2080 1473 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11 1464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2080 Mtr-Chr3 34254612 34261290 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2080 K18443 - gmx:100802024 2340.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2738 5 35708258 35717701 Mtr3g2080 3 34254612 34261290 PCT