Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2732 ATGGTTGCCTCAGTCTCAGCTGTTAGAGCTGTCAGTGGAACACCATTGAGTTTGAATAGCTCTGGAGCAGTAGCTTCAGTTCCAAGTTCATCATTCTTTGGAACCAGCTTAAAGAAAGTTACCTCGAGGTTACCAAACACAAAGGTTTCATCTGGAAGATTCAAAATTGTTGCTGCTGAGATTAATGAAAGCAAGCAAACTGACAAAGACAGATGGAGAGGTTTGGCCTATGATACTTCAGATGATCAACAAGACATCACAAGAGGGAAGGGTATGGTTGATACAGTTTTCCAAGCACCACAAGATTCTGGAACTCATTATGCAGTCATGAGTTCTTATGAGTACATTAGTACTGGACTTAGACAGTACAACCTTGACAACACCATGGATGGTTTTTACATTGCACCTGCTTTTATGGACAAGCTTGTTGTACACATCACTAAGAACTTCTTGACTCTGCCTAATATCAAGGTTCCTCTCATTCTTGGTATCTGGGGAGGTAAAGGTCAAGGAAAATCTTTCCAAGCTGAGCTTGTCTTTGCCAAGATGGGCATCAACCCTATCATGATGAGTGCTGGAGAGCTAGAAAGTGGAAATGCGGGAGAACCAGCAAAACTAATTCGACAAAGATACAGAGAAGCATCAGACATAATAAGAAAAGGGAAAATGTGTTGTCTCTTCATAAACGATCTTGATGCAGGAGCCGGTCGTATGGGTGGAACAACACAGTACACAGTGAACAATCAAATGGTAAATGCAACACTTATGAACATTGCTGATAACCCAACAAATGTTCAACTTCCTGGTATGTATAACAAAGAAGAGAATGCACGTGTGCCTATCATTGTTACTGGTAATGATTTTTCAACATTGTATGCTCCTCTTATTCGTGACGGTCGTATGGAGAAATTCTATTGGGCACCTACAAGAGAAGATCGTATTGGTGTTTGTAAAGGGATTTTTAGACATGATAATGTTCCTGAGGAAGATGTTGTTAAGATTGTTGACACTTTCCCTGGTCAATCCATTGATTTCTTTGGTGCACTTAGGGCAAGAGTATATGATGATGAAGTGAGAAAGTGGATTGCTGGTGTTGGCATTGAAACCATTGGGAAAAAGCTTGTGAACTCAAAAGAAGGACCTCCAACTTTTGATCAACCCAAGATGAGTTTGGAGAAACTGTTGGAGTATGGTAACATGCTTGTCCAAGAACAAGAAAATGTGAAGAGAGTTCAATTGGCAGACAAGTATTTGGAAGGGGCTGCTCTTGGTGATGCTAATCAAGATGCTATCAAGAGTGGATCTTTCTATGGTAAGGCAGCTCAACAAGTAAATATTCCTATTCCTGAAGGTTGTACGGATCCAAATGCCAAAAACTTCGACCCAACTGCTAGAAGTGATGATGGAACATGCTTATACACATTTGAATAA 1431 0.4046 MVASVSAVRAVSGTPLSLNSSGAVASVPSSSFFGTSLKKVTSRLPNTKVSSGRFKIVAAEINESKQTDKDRWRGLAYDTSDDQQDITRGKGMVDTVFQAPQDSGTHYAVMSSYEYISTGLRQYNLDNTMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQAELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREASDIIRKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRHDNVPEEDVVKIVDTFPGQSIDFFGALRARVYDDEVRKWIAGVGIETIGKKLVNSKEGPPTFDQPKMSLEKLLEYGNMLVQEQENVKRVQLADKYLEGAALGDANQDAIKSGSFYGKAAQQVNIPIPEGCTDPNAKNFDPTARSDDGTCLYTFE* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2732 476 Pfam ATPase family associated with various cellular activities (AAA) 164 305 IPR003959 GO:0005524|GO:0016887
Mtr5g2732 476 PANTHER ATPASE, AAA-TYPE, CORE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 1 475 - -
Mtr5g2732 476 Gene3D - 309 421 - -
Mtr5g2732 476 Gene3D - 124 308 IPR027417 -
Mtr5g2732 476 PANTHER - 1 475 IPR044960 -
Mtr5g2732 476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 129 377 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2732 Mtr-Chr5 35630182 35635126 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2732 - - gmx:100806240 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2071 3 34151148 34154582 Mtr5g2732 5 35630182 35635126 ECH
Mtr5g2732 5 35630182 35635126 Mtr5g2732 5 35630182 35635126 ECH