Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2071 ATGGCTGCTTCAGTTTCAACTGTTGGAGCTGTCAAAACTCCAATGAGCTTGAATGGCTCAGTAGTAGCTGGACCAACAGTTTCTAATTCAGCTTTCTTCGGCACAAGCTTGAAAAAGCTTACCGCAAGACTTCCAAACACAAAAGTTTCCTCAGGAAGCTTCAAAGTTTTTGCTAAAGAGATCGATGAGGGTAAACAGACCGACGGAGACAGATGGAGGGGTTTGGCCTATGATATATCAGATGACCAACAAGACATCACAAGAGGAAAGGGTATGGTTGATTCAGTTTTCCAAGCACCACAAGATACTGGAACTCATTATGCAGTCATGAGTTCTTATGAGTACCTTAGTACTGGACTTAAACAGTACAACTTTGACAACACTATGGATGGATTTTACATTGCTCCTGCTTTTATGGACAAGCTTGTTGTTCACATCACCAAGAATTTCTTGACCCTACCAAACATCAAGGTTCCACTCATTCTTGGAGTCTGGGGAGGAAAAGGACAGGGAAAATCTTTCCAAGCTGAGCTTGTCTTTGCTAAGATGGGAATCAACCCCATCATGATGAGTGCTGGAGAGCTTGAAAGTGGAAATGCAGGAGAGCCAGCAAAACTGATCAGACAGAGATACCGTGAAGCCGCTGACATTATCAGGAAGGGAAAGATGTGTTGTCTGTTCATCAACGATCTCGATGCAGGAGCAGGTCGTATGGGTGGAACCACACAATACACTGTCAACAACCAGATGGTGAATGCCACACTCATGAACATTGCTGATAACCCCACCAATGTCCAACTCCCTGGTATGTACAACAAGGAAGATAACGCTCGTGTGCCCATCATTGTCACCGGTAACGATTTCTCAACACTTTATGCTCCTCTCATCCGTGATGGTCGTATGGAGAAATTCTACTGGGCTCCTACAAGAGAAGACCGTATTGGTGTCTGCATTGGAATTTTCCGCCATGACAATATCGCAAAAGATGACATTGTCAAGATTGTTGACACCTTCCCCGGCCAATCCATCGATTTCTTCGGTGCATTGAGGGCTAGAGTGTACGATGATGAAGTGAGGAAGTGGGTTTCTGGAGTTGGTATTGAAACAATTGGAAAGAAGCTTGTGAACTCAAAGGACGGACCACCAGTGTTTGAGCAGCCAAAGATGACACTAGAAAAGCTATTGGAGTATGGTAACATGCTTGTCTCAGAACAAGAGAATGTGAAGAGAGTTCAATTGGCAGACAAGTATTTGGAAGGTGCTGCTCTTGGTGATGCTAATCAAGATGCTATTAAGGAGGGAAAATTCTAG 1311 0.4409 MAASVSTVGAVKTPMSLNGSVVAGPTVSNSAFFGTSLKKLTARLPNTKVSSGSFKVFAKEIDEGKQTDGDRWRGLAYDISDDQQDITRGKGMVDSVFQAPQDTGTHYAVMSSYEYLSTGLKQYNFDNTMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGVWGGKGQGKSFQAELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCIGIFRHDNIAKDDIVKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGVGIETIGKKLVNSKDGPPVFEQPKMTLEKLLEYGNMLVSEQENVKRVQLADKYLEGAALGDANQDAIKEGKF* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2071 436 PANTHER ATPASE, AAA-TYPE, CORE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 1 436 - -
Mtr3g2071 436 Gene3D - 309 421 - -
Mtr3g2071 436 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 129 335 IPR027417 -
Mtr3g2071 436 Pfam ATPase family associated with various cellular activities (AAA) 164 305 IPR003959 GO:0005524|GO:0016887
Mtr3g2071 436 Gene3D - 124 308 IPR027417 -
Mtr3g2071 436 PANTHER - 1 436 IPR044960 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2071 Mtr-Chr3 34151148 34154582 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2071 - - gmx:100789921 758.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2071 3 34151148 34154582 Mtr5g2732 5 35630182 35635126 ECH
Mtr3g2071 3 34151148 34154582 Mtr3g2071 3 34151148 34154582 ECH