Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2657 ATGACAACTATGGTATCTCAAGAAAGCGTTGTTGCATCGGTTTCTCGTACTGGCAGGGATTTGCAGCGCTACAGAAAAGGTCGTCGTCAAGTTGTTGGATGCATACCATATAGATACATAATTGGTGACCAAACTTCCTTAGGGGCAAATGAAGAATTAGAAGTTTTGGTTATTACTTCGAAGAAAGGCAAAAGGATGTTATTTCCCAAGGGAGGTTGGGAAATGGATGAATCAAAAAAGGAGGCAGCTTTGCGAGAAACCATAGAGGAAGCAGGAGTAAGAGGCATTGTAGAGGGTAAATTGGGTAAGTGGAGGTTTAAAGGTAAAAACTATGGTTATGAAGGCTACATGTTCCCTCTGCTTGTTCAAGAGCAATTTGAGATATGGCCAGAGCAGAGTGTTCGTCAAAGAACATGGATGAATGTTTCTGAAGCAAGGGAAGTTTGTCAACAGAGGTGGATGAAAGAAGCATTAGAGAGACTAGTAGATCGTCTCAAAGGTCATAAACTTGATGATGTAAAAGAATTAGTAGTAGTAGGTTCTGTACAATGCACAGGAGACGCCAATTCTGACTAG 576 0.4115 MTTMVSQESVVASVSRTGRDLQRYRKGRRQVVGCIPYRYIIGDQTSLGANEELEVLVITSKKGKRMLFPKGGWEMDESKKEAALRETIEEAGVRGIVEGKLGKWRFKGKNYGYEGYMFPLLVQEQFEIWPEQSVRQRTWMNVSEAREVCQQRWMKEALERLVDRLKGHKLDDVKELVVVGSVQCTGDANSD* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2657 191 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 15 165 - -
Mtr5g2657 191 ProSitePatterns Nudix box signature. 71 92 IPR020084 GO:0016787
Mtr5g2657 191 CDD Nudix_Hydrolase_9 30 155 - -
Mtr5g2657 191 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 7 187 - -
Mtr5g2657 191 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 7 187 - -
Mtr5g2657 191 Pfam NUDIX domain 50 158 IPR000086 -
Mtr5g2657 191 ProSiteProfiles Nudix hydrolase domain profile. 27 162 IPR000086 -
Mtr5g2657 191 SUPERFAMILY Nudix 23 165 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2657 Mtr-Chr5 34618208 34621164 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2657 K07766 - gmx:100305863 297.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1992 3 33015096 33017641 Mtr5g2657 5 34618208 34621164 PCT