Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1992 ATGCTATCCACTCAACAAAACTCTCATTCGTTTCTTAAACTCTCTGTTTCATTATTCTTTACAATAATGGTTGCTTTGGTTTCTCAAGAAAATGTTGTCACATTGGTTTCTCGTACTGGTAGAGAGTTACAACGTTATAGAAAAGGTCGTCGCCAAGTTGTTGGATGTATACCATACAGATATAAGATTGGGGAGAAAAATTCATTGGATGTTTCAGATGAATTGGAAGTTCTTGTTATAAGTTCTCAGAAAGGGAAAGGGATGCTATTTCCAAAGGGAGGCTGGGAATTAGATGAATCTCAAAAGGAGGCAGCTTTGAGAGAAACTATGGAGGAAGCTGGTGTACGAGGCATTGTTGAGGGTAAATTGGGTAAATGGAGCTTCAAGAGTAAAACATATGATACTTTATATGATGGTTACATGTTCCCTCTACTTGTTCAAGAGGAATTGGAGTTCTGGCCTGAACAAAACCTTCGTCAAAGAAGATGGATGAGCATATCTGAAGCAAGAGATGTTTGTCAACACTGGTGGATGAAAGAGGCTTTGGACAGACTAGTAAACCGTCTATTAGGTCAAAAACTTGGTTCTGAGAAGCAAGTTCTACGTTCTCTAAATTGCATTGGAGATGCCAAATCTGACTTGTTAAAAGTGTAA 654 0.3838 MLSTQQNSHSFLKLSVSLFFTIMVALVSQENVVTLVSRTGRELQRYRKGRRQVVGCIPYRYKIGEKNSLDVSDELEVLVISSQKGKGMLFPKGGWELDESQKEAALRETMEEAGVRGIVEGKLGKWSFKSKTYDTLYDGYMFPLLVQEELEFWPEQNLRQRRWMSISEARDVCQHWWMKEALDRLVNRLLGQKLGSEKQVLRSLNCIGDAKSDLLKV* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1992 217 ProSitePatterns Nudix box signature. 93 114 IPR020084 GO:0016787
Mtr3g1992 217 SUPERFAMILY Nudix 45 189 IPR015797 -
Mtr3g1992 217 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 28 209 - -
Mtr3g1992 217 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 36 188 - -
Mtr3g1992 217 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 28 209 - -
Mtr3g1992 217 CDD Nudix_Hydrolase_9 52 179 - -
Mtr3g1992 217 Pfam NUDIX domain 76 183 IPR000086 -
Mtr3g1992 217 ProSiteProfiles Nudix hydrolase domain profile. 49 186 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1992 Mtr-Chr3 33015096 33017641 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1992 K07766 - gmx:100795999 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1992 3 33015096 33017641 Mtr5g2657 5 34618208 34621164 PCT