Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2541 ATGGGCGATCTTCATCTAAACGGCGTCGTTTTCGCGGAGGATCGCCCTTACTCTTCTTCACCGCCGTCGCCGCCGCTTCCTGTTTTCAATCCCGATCCTTCTTCCGTCACCGATGAAGCTTCATCAGCGGCCGAACAAACCACCGCTGAGATTCTGCGCCGAATTCAACCTACTCTCGCCGCTGATAGACGGAGGAGAGAAGTTGTTGATTACGTTCAGAGACTTATTCGTTATGGTGCTCGCTGTGAGGTCTTTCCATATGGATCAGTTCCGTTAAAAACATATCTTCCGGATGGAGATATTGATCTGACTGCACTTAGTCCTCAAAACATTGAGGATGGCTTGGTATCTGATGTTCATGCTGTTCTTCGGGGAGAGGAAAACAATGATGCTGCTGAATATGAAGTAAAGGATGTTCGTTTCATTGATGCAGAGGTTAAGCTTGTAAAATGTCTTGTACAGAATATTGTTGTAGACATCTCTTTCAATCAGTTAGGAGGACTCAGTACATTATGTTTTCTTGAGAAGGTTGACCGTCTTGTAGCCAAGGATCATATCTTCAAACGTAGTATCATCCTGATTAAAGCTTGGTGCTACTATGAGAGTCGTATTCTTGGTGCCCACCATGGGCTGATCTCTACATATGCTTTGGAAACACTAGTTCTGTATATTTTCCATCGATTTCATGTGTCCTTAGATGGTCCTCTAGCAGTTCTCTACAGATTTTTGGACTACTTCAGCAAATTTGATTGGGACAATTATTGTGTAAGTTTGAAGGGACCAGTTGCCAAATCATCTCCGCCTGATGTAGTAGCTGAGGCACTGGAAAATGGGGGAAATACTCTGCTGACTGATGAATTCATTAGAAGCTGCGTGGAATCATTCTCGGTACCTCCAAGGGGGCTCGATCTAAATTTGCGTGCATTTCCCCATAAGCACCTTAACATCATTGATCCACTAAAGGAAAACAACAACCTTGGCCGTAGTGTCAACAAAGGTAATTTCTATCGAATACGCAGTGCATTTAAGTATGGTGCCCGTAAACTTGGCTGGATTCTTATGTTACCGGAAGATAGAATAGCAGATGAGCTTAATAGGTTTTTTGCAAACACTTTGGATAGGCATGGAAGCAATCAAGGGAATGAAGACAATTCATTTTTGTGTTTATCTACTGGATCCAAGGATATGATAACTGGAAATCAACATAATTATGAAATTAGAAGTGAAAGAGAAAGATATGTAGTAAAAGATATCAGTTCTTTGGAAGGGTCATCATTCGACTCCTCTGGAGATGGAAATACAGTTGCAATTTACAAACTTGGTGAAGATTCTAAACATGTTGCAACGTCCGGAGTCTTAGGCATTGCGAGCACTAATGGTTTTTCACATTGTTCAAATGGGAAAGCTGAAAGTAGGAGTTGTAGCGAAACTGATGTAAACTCTATATTTGATGATGAGAAAGAGAAGCATGGTATGGTAAGCAATTCTCCCAGATCACACACTGATGAAAAGAATATGGCATCTAATGGTTCAACAGTTTTACGAGATGCTGCTAATAATCTTGAAAATGGTTTCTTTCATAGTGATAGATACAATAATAGTGTTTCTGGGGGGACTGAAGCTTCAAAATCATTGTTGGACCTTGCTGGGGATTATGACAGTCACATTGCAAACCTACATTATGGCCATATGTGCAATGGTTATCCTGTCTCTCCTGTTGTGGTACCTAGTCCTCCTAGGTCTCCCAAGTTTCATAATAGGAATTCGTGGGAAACTGTTCGTCAATGTCTACAGATGAACCACAGCATTCATCCCCAGACAAACTCAAATGGTGTTGTGGGACCACTTTACCTCGTAAACCATCCTACTATACCAATGGCCTCTTTCGGCGCAGAAGAAAAGAGAAAGCCACGAGGAACAGGAGCATACTTCCCTAATATGACTTCTCGTCCATTCAGGGATAATAGGCCAATGCCGGGTAGGGGAAGGGGTCTTGCACCCGGTACCCATGGGCATTTGCAGAGATACAATCATAGCAATGGGTTCGCTCTAGCTTCACAAGAGGTCAATTTGTCTGTGGAAGGTAGTTTTGAACCTGCTCTAGAAGTATATCCTGGTCTTAGTAATGGTAGACCCAGATCTTCAGAAACCTATTTCTCTCAACCTTCCACGTGGGGAGCACGCCATGCTAATGGTTTCCCTCACTCGTCTGATAAACATGAGTCTGGCTCTGGTAGCCCTCAGCTTCGTGGATCCCCAAGAACTGAAGTGAGCAATCACCCAGACCAAGGCATTTCTACTTCTGGGGTATCTGTACCTAACACGGAGATAGCAACAGAGGAAAAGTCTAATTCATTATCTGTAGCAGATCCCAAAAGGATTGAAGTGCAAGGTTATCATTTGAAGAATGAAGATGACTTTCCTCCGCTTTCGAACTGA 2439 0.4285 MGDLHLNGVVFAEDRPYSSSPPSPPLPVFNPDPSSVTDEASSAAEQTTAEILRRIQPTLAADRRRREVVDYVQRLIRYGARCEVFPYGSVPLKTYLPDGDIDLTALSPQNIEDGLVSDVHAVLRGEENNDAAEYEVKDVRFIDAEVKLVKCLVQNIVVDISFNQLGGLSTLCFLEKVDRLVAKDHIFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHRFHVSLDGPLAVLYRFLDYFSKFDWDNYCVSLKGPVAKSSPPDVVAEALENGGNTLLTDEFIRSCVESFSVPPRGLDLNLRAFPHKHLNIIDPLKENNNLGRSVNKGNFYRIRSAFKYGARKLGWILMLPEDRIADELNRFFANTLDRHGSNQGNEDNSFLCLSTGSKDMITGNQHNYEIRSERERYVVKDISSLEGSSFDSSGDGNTVAIYKLGEDSKHVATSGVLGIASTNGFSHCSNGKAESRSCSETDVNSIFDDEKEKHGMVSNSPRSHTDEKNMASNGSTVLRDAANNLENGFFHSDRYNNSVSGGTEASKSLLDLAGDYDSHIANLHYGHMCNGYPVSPVVVPSPPRSPKFHNRNSWETVRQCLQMNHSIHPQTNSNGVVGPLYLVNHPTIPMASFGAEEKRKPRGTGAYFPNMTSRPFRDNRPMPGRGRGLAPGTHGHLQRYNHSNGFALASQEVNLSVEGSFEPALEVYPGLSNGRPRSSETYFSQPSTWGARHANGFPHSSDKHESGSGSPQLRGSPRTEVSNHPDQGISTSGVSVPNTEIATEEKSNSLSVADPKRIEVQGYHLKNEDDFPPLSN* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2541 812 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 19 811 - -
Mtr5g2541 812 Gene3D - 164 362 - -
Mtr5g2541 812 MobiDBLite consensus disorder prediction 704 792 - -
Mtr5g2541 812 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 19 811 - -
Mtr5g2541 812 Gene3D Beta Polymerase, domain 2 57 163 IPR043519 -
Mtr5g2541 812 MobiDBLite consensus disorder prediction 710 727 - -
Mtr5g2541 812 SUPERFAMILY PAP/OAS1 substrate-binding domain 186 352 - -
Mtr5g2541 812 MobiDBLite consensus disorder prediction 630 674 - -
Mtr5g2541 812 CDD NT_PAP_TUTase 64 168 - -
Mtr5g2541 812 MobiDBLite consensus disorder prediction 13 43 - -
Mtr5g2541 812 SUPERFAMILY Nucleotidyltransferase 40 205 IPR043519 -
Mtr5g2541 812 MobiDBLite consensus disorder prediction 737 785 - -
Mtr5g2541 812 MobiDBLite consensus disorder prediction 487 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2541 Mtr-Chr5 33263019 33274534 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2541 - - gmx:100814626 1187.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2541 5 33263019 33274534 Mtr5g2541 5 33263019 33274534 ECH
Mtr5g2541 5 33263019 33274534 Mtr3g3263 3 46509216 46515588 ECH