Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3263 ATGGGTACTATACAACGAAATGTGTTACCGTTCTCCTTGTTTAACCAAAAACTGTTCTTAATGGATGAAGAGCTTTGGTTTATGGCTGAAGAGAGGGCCCAGGAAGTACTATATACAATTCAACCTAATGTTGTTTCTGAGGTGAACAGAAAGCGCATTATTGATTTTGTTCAGAGGCTGATTGGAGGTTACTATGGGGGAGAGGTATTTGTGTTTGGATCAGTCCCACTGAAAACCTATCTTCCAGATGGAGATATTGACTTGACAGTTCTCAGCCATGAAAGCGTTGAGGATGATTTGGTACAAGCTGTATGCAATCTACTTGAAAGTAGAGAGGAAGTAAAAGACGTACAACAAATACGTGCGCAGGTAAGGGTTGTCAAATGCACAGTGAAAAATATTGCAGTTGACATCTCCTTTAATCAGATGGCTGGACTCTGTGCGCTGCGCTTTCTGGAGCAGGTTGACCAACTTGTCGGGAAAAACCATGTCTTCAAACGCAGTATAATCTTAGTCAAAGCCTGGTGCTATTATGAGAGCCGAATTCTTGGTGCACACCATGGCCTGCTCTCAACATATGCAGTTGAAATATTGGTATTATATATTATCAATTGTTTTCATTCATCAGTGCGCGGTCCTCTAGAGGTGCTGTACAGATTTTTGGACTACTACAGCAAATTTGACTGGAAGAAGAATTATGTCACCATATATGGTCCACAAGCCTTATCCTCCCTACCAGAAATTGTTGAGAAACCAGAATGTGATGGAGGTGAGTTCTTGCTCAGTAAAGAGCTTCTAAAACATTACAAGGATATGTGCTTTGTTCCAAAGGCATCCGTGACTTCGCCCCGTGAATTTTCCATCAAGTTCATTAACATCTTGGATCCTCTAAAAAATGACAACAACCTAGGCCGCAGTGTCAACATAGGGAATTTACATCGAATTACATTCGCTCTAAGGTTTGGTGCTCGACAGCTTAAGGAGATCCTTAAGCTTCCAGGACAAAGAATGGGTGGAGCACTTGAGGTGTTTTTCATGAACACCTTGAATAGAAATGGTAAAGGACAAAGGCCAGATATTGATTTTCCTATTCCTGCATTTGGTACTGGAAAATCTGAAGAGCCTGTCCTCGTTGGAGACTGTGACAGTTACTATGGTGGCTTAAAATACGTACAGTGGTATCGTAACTATGCCATGCCGCTCGTTGCACAGCCCATTCCCCCATCACCACAATTTGATGTTGATATGCTTGGACCACAATTTGATGCTGATATGCTTGCACCACAACAAAACTGGTATATGTATCATCATAGAAGTGCTGATTATTATGTGCCGAGTCAGACATTCTTTCATCCAAATGTTCCTCCACAACCAACTTATGGCCTTGACGAAATAAGGAAATCGCGAGGAACAGGCACTTACATACCTGACATGACTCTTACTACCAACTGGAACGCCCGTGCAAGAGGGTCCAGGCCAAGAAGATCCAGCCGTGCGAATAATAATAATAATAATGCTTCATCCAAGAGAAAACAAATAGAAGAGGTTCCTCCTGAGACTGTCATGAATGATAAGAATTCCAAGTCCTTTGAGCTCTCAAAGGAAGATTTTCCTGTTCTTTCAAGCATTGGCAACAGCAGTTTGTCAGCATCTCATCAATCTGAGCAGGACCAGAATTCTTCATCGCCTCAAATATATATCGAGTTTGGAACTTACAGTGCCTCAAAATCCCTGAAAGAACTGAGTTTGGGAACAAAGGATCAGAAAAAGGATTCTGGTGTTTCATCCTCTAAGACTTTGGGAACAAAGGATCGGAAAAAGGATTCCGGTGGTTCATCCTCTAAATGCGCTACTACACCAGTTGTTCCAAGTCGGGCAGTGCAGACAAAGGAGAAATGTACTCGGATGGAGAAGAAGATGGGTTGA 1926 0.4216 MGTIQRNVLPFSLFNQKLFLMDEELWFMAEERAQEVLYTIQPNVVSEVNRKRIIDFVQRLIGGYYGGEVFVFGSVPLKTYLPDGDIDLTVLSHESVEDDLVQAVCNLLESREEVKDVQQIRAQVRVVKCTVKNIAVDISFNQMAGLCALRFLEQVDQLVGKNHVFKRSIILVKAWCYYESRILGAHHGLLSTYAVEILVLYIINCFHSSVRGPLEVLYRFLDYYSKFDWKKNYVTIYGPQALSSLPEIVEKPECDGGEFLLSKELLKHYKDMCFVPKASVTSPREFSIKFINILDPLKNDNNLGRSVNIGNLHRITFALRFGARQLKEILKLPGQRMGGALEVFFMNTLNRNGKGQRPDIDFPIPAFGTGKSEEPVLVGDCDSYYGGLKYVQWYRNYAMPLVAQPIPPSPQFDVDMLGPQFDADMLAPQQNWYMYHHRSADYYVPSQTFFHPNVPPQPTYGLDEIRKSRGTGTYIPDMTLTTNWNARARGSRPRRSSRANNNNNNASSKRKQIEEVPPETVMNDKNSKSFELSKEDFPVLSSIGNSSLSASHQSEQDQNSSSPQIYIEFGTYSASKSLKELSLGTKDQKKDSGVSSSKTLGTKDRKKDSGGSSSKCATTPVVPSRAVQTKEKCTRMEKKMG* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3263 641 CDD NT_PAP_TUTase 49 152 - -
Mtr3g3263 641 Pfam Nucleotidyltransferase domain 51 118 IPR002934 GO:0016779
Mtr3g3263 641 SUPERFAMILY PAP/OAS1 substrate-binding domain 164 331 - -
Mtr3g3263 641 Gene3D - 204 332 - -
Mtr3g3263 641 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 1 594 - -
Mtr3g3263 641 MobiDBLite consensus disorder prediction 460 529 - -
Mtr3g3263 641 Gene3D Beta Polymerase, domain 2 29 163 IPR043519 -
Mtr3g3263 641 MobiDBLite consensus disorder prediction 582 641 - -
Mtr3g3263 641 PANTHER NUCLEOTIDYLTRANSFERASE DOMAIN PROTEIN 1 594 - -
Mtr3g3263 641 Coils Coil 641 641 - -
Mtr3g3263 641 SUPERFAMILY Nucleotidyltransferase 24 183 IPR043519 -
Mtr3g3263 641 MobiDBLite consensus disorder prediction 474 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3263 Mtr-Chr3 46509216 46515588 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3263 - - gmx:100787145 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2541 5 33263019 33274534 Mtr3g3263 3 46509216 46515588 ECH
Mtr3g3263 3 46509216 46515588 Mtr3g3263 3 46509216 46515588 ECH