Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2512 ATGCCTATAGAGCAAGAGGATCACAACAAGAAATTAGTAACTGATTTATACAAAGCCCTAATCTCCAAAGACACAAACACAATGCAACATCTTCTTGCCTCAGATTTGGAATGGTGGTTCCATGGTCCACCATGTCATCGTCACTATTTGGTCCCTATCCTCACAGGCTCATCATCATCATCATCAATATCTCAAGAATCTTTAGTTCCTAATCTTATAATTGGGTTTGGATCAGTGATTGTTGCTGAAGGCTATGATGAAAAAAATATGGTATGGTGGGTTCATGCATGGTCTATTTCTGATGGAATTATCACTGAGGTTAGAGAATATGTTAACACTTCGGTTTATGTTACTAAGCTTGGTTTGCATTCAGAAGATGTTGTTGTTGGTTCCAGTTGTAGGTGCATTTGGCAGAGTAAGCTTTGTGATGGTTCGGTTCCTGGACTCATTCTCACAATCTAG 462 0.3918 MPIEQEDHNKKLVTDLYKALISKDTNTMQHLLASDLEWWFHGPPCHRHYLVPILTGSSSSSSISQESLVPNLIIGFGSVIVAEGYDEKNMVWWVHAWSISDGIITEVREYVNTSVYVTKLGLHSEDVVVGSSCRCIWQSKLCDGSVPGLILTI* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2512 153 Gene3D - 3 126 - -
Mtr5g2512 153 PANTHER WOUND-INDUCED PROTEIN, WUN1-RELATED 4 153 - -
Mtr5g2512 153 SUPERFAMILY NTF2-like 8 121 IPR032710 -
Mtr5g2512 153 PANTHER OS07G0691300 PROTEIN 4 153 IPR009798 -
Mtr5g2512 153 Pfam Wound-induced protein WI12 53 153 IPR009798 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2512 Mtr-Chr5 32947997 32948458 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2512 - - var:108336652 221.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2512 5 32947997 32948458 Mtr5g2512 5 32947997 32948458 ECH
Mtr5g2512 5 32947997 32948458 Mtr3g2220 3 35851462 35852298 ECH
Mtr5g2512 5 32947997 32948458 Mtr3g1788 3 30290049 30290934 ECH
Mtr7g1746 7 33340236 33341061 Mtr5g2512 5 32947997 32948458 ECH