Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2220 ATGCGCACACTCACTGGCGATACCACCGCCGTTGATACCTTCCGTTTTGTTCCTCAGTCCGTCATCTCTTTCGGCTCCACCGTTATTGTTGAAGGCTGCGATACCTCACGCGCTATTTCCTGGGTTCACGCGCTGACTGTTGTGGATGGGATAGTCACTCAGGTTAGGGAGTATTTCAACACTTCCCTTACCGTCACACACTTCGCCGGGAAAGACTCCGGTGAGATTGTGCCGGCTAATCCCGGTGGTTTTCATTGTGTTTGGGAAAGTAGCGTTTCTGATCGGGTCGGTAAATCCGTACCCGGTTTGGTCCTCGCAATATAA 324 0.5185 MRTLTGDTTAVDTFRFVPQSVISFGSTVIVEGCDTSRAISWVHALTVVDGIVTQVREYFNTSLTVTHFAGKDSGEIVPANPGGFHCVWESSVSDRVGKSVPGLVLAI* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2220 107 Gene3D - 1 73 - -
Mtr3g2220 107 PANTHER SENESCENCE ASSOCIATED GENE 20 1 107 - -
Mtr3g2220 107 PANTHER OS07G0691300 PROTEIN 1 107 IPR009798 -
Mtr3g2220 107 SUPERFAMILY NTF2-like 4 68 IPR032710 -
Mtr3g2220 107 PIRSF Wun1 1 107 IPR016533 -
Mtr3g2220 107 Pfam Wound-induced protein WI12 1 107 IPR009798 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2220 Mtr-Chr3 35851462 35852298 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2220 - - lja:Lj0g3v0040339.1 155.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1746 7 33340236 33341061 Mtr3g2220 3 35851462 35852298 ECH
Mtr5g2512 5 32947997 32948458 Mtr3g2220 3 35851462 35852298 ECH
Mtr3g1788 3 30290049 30290934 Mtr3g2220 3 35851462 35852298 ECH
Mtr3g2220 3 35851462 35852298 Mtr3g2220 3 35851462 35852298 ECH