Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2240 ATGGAGGAGAAAGTGAGTGACACCCTAAGAGTCTTACAAAATGATGGAGACTCATTTTCTCAAAGAGCAGAAATGTATTACAGAAAAAGGCCTGAGCTTGTTGAATTTGTAGAAGAAGCCTTTAAAGCATATAGAGCCTTAGCCGAAAGATATGATCATTTATCAAGAGAACTTCAAAGTGCAAACAGAACTATTGCAAGTGTCTTCCCTGATCAAGTTCCACACCATATTGATGATGACGACGACGAAGAAAGTGACGCAGGAACAATTTCTCCATCTCCTGACTTCAACAACCAAATTCAAAAATCAGTCGTTCCAAAGGTTCCAAAGAAAGATTTTCGAAGTCCTTCGATGTTGCTATCCCGAAAAGGTCCAACTAAGAGAACTTCTTTTTCAAAATTTATTCCAACAACTCCAGGATCAGATCTTACCAAAACTGAAGCAATAGGCGAGATCGACAAACTTCAGAAGGATATTTTGGCGCTGCAGACCGAGAAAGAGTTTGTGAGAAGCGTGTATGAGCGCGCATACGAAAAGTATTGGGAAATCGAAGATCAGATAACAGGTATGCAGAAACATGTTTGCAGTTTGCAAGATGAATTTGGCGTCGGTACTGTCATTGAAGACGACGATGCTAGAGCTTTAATGGCAGCAACGGCACTGAAATCATGTCAAGAGACGCTTTCAAAGTTGCAAAAGATTCAAGCACAGTCATCAGTAGAAGCTAAAGTTGAATATGAAAGAGTTAAAAAAGCTCATGAGATGTTTGAGAATCTTAGAGATCAATTCATCACTAAATTCACGGGTCAAGAAGAACAAGAACATGCCGACACATGTAAGAGCATAATTAGTGAAGAACAGAAAAATATTGATAAAGAGATAGCTAGTTTGGAACAACAAGAGAATGATGTTGTTTTGTTGAGAGAAACGATTAAAGAAAAATTGGAACAAGATTCTGGAAACACTCTTACTGTGACTGAAATGGCCGAATGTATTGATGAGCTTGTGAATAAAGTTGTTACTTTGGAAACCGCGGTGTCTTCCCAAAACGGTATGGTTAATCGATTGAGATCAGAAACCGATGACCTTCAAACAAATATAAAGAAATTGGAAGAAGACAAAGAAATGCTTATAGCAGGATCAGAAGTTACTAATAAGAAGCTAAAAGAATTTGAAGAGGAATTGTTGAGAGTTAAAATTCTCAACAAAAGTGTTAAATCACAAGATAATAGCTTAAGAACGCATTTCACTGAAGCTAGTTGTAATATTGAGCATTTATCTGGAAAGTTGAATAATATGAAACATGATGTGGAAGATGTGAATTTAGTACTTTACAAGAAGAAGAAAACTGATTCTAACGTTGATGATTCTGTAATGAAGGATGTTGACGGTCCTGCTATGAAGGATGTTGACGATTCTGCTACGAAGGATATTAATACAAAAGAGGAAAATGATGATGGTGTAAATGTGGATGATAACAAGTCTATGATGAGCCAAAATACTAATTTTATTACTGAAAGGATTGAAAAAATGGGACAGCACGATAAAGATGATTTGTCCGATACAATGAGCAATCTTGATATTGAATCACAGGATTTTGACACTGGTGAGGGTGATCAGCCTAATTGGAGGCAGATGTTTTTGAATGGATTGGATGATAGAGAGAAAATTCTATTGGAGGAGTATACATCTGTTTTGAGAAACTATAAAGATGTTAGGGTGAAGCTTAATGATGTTGAAAAGAAAAATAGGGACAGCATTTTTGAGTTGGCACTTCAGTTAAGAGAAATGAAGAATGCTCTTGTGACAAGGGACAAAGAGATACAATTTTTAAATCAGAAGATAAACGGTCCAGACACAAATCCAGACGAAAGTCCATACACAACAACCACAGAATACAAATATACACCACATGAAGCACTTTTTAGAAAATCAGGTCAAGGATCCAACATGCAGGATACTGATACTTCATCTCTAAACATCGACAACAATTCTATCAGAACATCTTTCGCAGACCAACATGAAAACTCATCAGCCCATGGCCTTAGAACCCTTGAGAAGCTCATGGCTGACCAAGATAAGCGGCAAAACCTTTCGGATTTAGAAAAGAAATTCCGTTCAGACCTTGACGACCTCCTCGAGGAAAATCTCGAGTTTTGGCTAAGATTTAGCACATCAGTTCATCAGATTCAAAAGTTTCAAAACTCAATACAAGACTTAAAAGTAGAACTAAGGACAATAAAGGAAAACAACAAATCCGAAGGACATTCACATTCTAAACATCAACAACCTATGCAATCTCAACTTAGGCCGATTTTTCGACATTTAAGAGAGATTAGAACTGAATTATCGCTTTGGCTTGAACATAATGCAGTGTTGCAGGATGAACTACAAGGTAGATATTCATCATTATGCAACATTCAAGATGAAATTGCAAGAGCAGGTAATAATAATAATGAAGAATCTGGTGGTGCTGATGAAAATAATAAAGATAAAGATGCTGAGATAATAAGTGGTTATCAAGTTGCAAAATTTCAAGGTGAGATTCTTAACATGAAACAAGAGAATAGTAAAGTTGCAAGTGAGTTACAAGCTGGTCTTAGTCTTGTGAAAGGAATGAAAAATGATGTTGAGAAGACACTTGATGAACTTGATCAAGCTATTGGGATTAGCAGTGCTCATAGAGAGACAAAAAAGAACACAAAAGGTAATAGAATACCTTTGAGGTCTTTCTTGTTTGGTGTCAAGTTAAAGAGACAAAAGCAGTATCAATCACTGTTTTCATGTGTCAATCCTACACTGTCTAAACAAAATAGTATCAATGAGCAAGTACCAGCTCCAATAGAGAGAGAGCAAATTTGA 2862 0.3648 MEEKVSDTLRVLQNDGDSFSQRAEMYYRKRPELVEFVEEAFKAYRALAERYDHLSRELQSANRTIASVFPDQVPHHIDDDDDEESDAGTISPSPDFNNQIQKSVVPKVPKKDFRSPSMLLSRKGPTKRTSFSKFIPTTPGSDLTKTEAIGEIDKLQKDILALQTEKEFVRSVYERAYEKYWEIEDQITGMQKHVCSLQDEFGVGTVIEDDDARALMAATALKSCQETLSKLQKIQAQSSVEAKVEYERVKKAHEMFENLRDQFITKFTGQEEQEHADTCKSIISEEQKNIDKEIASLEQQENDVVLLRETIKEKLEQDSGNTLTVTEMAECIDELVNKVVTLETAVSSQNGMVNRLRSETDDLQTNIKKLEEDKEMLIAGSEVTNKKLKEFEEELLRVKILNKSVKSQDNSLRTHFTEASCNIEHLSGKLNNMKHDVEDVNLVLYKKKKTDSNVDDSVMKDVDGPAMKDVDDSATKDINTKEENDDGVNVDDNKSMMSQNTNFITERIEKMGQHDKDDLSDTMSNLDIESQDFDTGEGDQPNWRQMFLNGLDDREKILLEEYTSVLRNYKDVRVKLNDVEKKNRDSIFELALQLREMKNALVTRDKEIQFLNQKINGPDTNPDESPYTTTTEYKYTPHEALFRKSGQGSNMQDTDTSSLNIDNNSIRTSFADQHENSSAHGLRTLEKLMADQDKRQNLSDLEKKFRSDLDDLLEENLEFWLRFSTSVHQIQKFQNSIQDLKVELRTIKENNKSEGHSHSKHQQPMQSQLRPIFRHLREIRTELSLWLEHNAVLQDELQGRYSSLCNIQDEIARAGNNNNEESGGADENNKDKDAEIISGYQVAKFQGEILNMKQENSKVASELQAGLSLVKGMKNDVEKTLDELDQAIGISSAHRETKKNTKGNRIPLRSFLFGVKLKRQKQYQSLFSCVNPTLSKQNSINEQVPAPIEREQI* 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2240 953 Coils Coil 353 380 - -
Mtr5g2240 953 Pfam KIP1-like protein 1 52 IPR011684 GO:0003779
Mtr5g2240 953 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 1 58 IPR011684 GO:0003779
Mtr5g2240 953 MobiDBLite consensus disorder prediction 70 133 - -
Mtr5g2240 953 Coils Coil 695 715 - -
Mtr5g2240 953 PANTHER PROTEIN NETWORKED 2D 1 939 - -
Mtr5g2240 953 MobiDBLite consensus disorder prediction 90 104 - -
Mtr5g2240 953 PANTHER PROTEIN NETWORKED 2A 1 939 - -
Mtr5g2240 953 Coils Coil 388 408 - -
Mtr5g2240 953 Coils Coil 145 165 - -
Mtr5g2240 953 MobiDBLite consensus disorder prediction 456 495 - -
Mtr5g2240 953 Coils Coil 730 750 - -
Mtr5g2240 953 MobiDBLite consensus disorder prediction 456 490 - -
Mtr5g2240 953 Coils Coil 37 64 - -
Mtr5g2240 953 Coils Coil 280 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2240 Mtr-Chr5 29318186 29321758 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2240 - - mtr:MTR_5g066340 1825.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2240 5 29318186 29321758 Mtr5g2240 5 29318186 29321758 ECH
Mtr5g2240 5 29318186 29321758 Mtr3g3563 3 49492083 49497939 PCT