Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3563 ATGTTGCGAAGAGCAGCAACCAATGCATATTCATGGTGGTGGGTTAGCCACATCAGGACAAAACAATCAAAATGGCTGGAACAAAGTCTCCAAGATATGGAGGAGATAGTGGCTGAGGCTCTTAAAATCATTGATGATAATGGGGACTCATTTGCTCAAAGGGCGGAAATGTACTATAGGAAAAGACCAGAACTGATAAATTTTGTGGAAGAAGCCTTTAGAGCATATAGAGCATTAGCAGAGAAATATGATCATCTATCAAAGGAGCTACAAAGCGCGAACCGCACAATTGCCACCGTTTTTCCTGAACAAGTCCATTATAGAATAGACGAAGATGAAGATGAAGAAAGTGTCCCTGAAACTAATTCATTACCTCCTAACCCTAATAACCAAACAGAAAAACAATGCAACATCCCTAAACCTCCAAGTATCCCAAAGAAGGTTTTTCGAAGTCAGTCTATGTTGCTATCAAGAAAAGGAACACATAGAAGAAGTGTCAGCTCGGAAAAATCTGTTTCAAATCCAACAATTCAATGTTCAGGTTTGAGTAAGGTTGAAGCATTAGCTGAAATAGACAAGCTTCAGAAAGAAATTTTGGCATTGCAAACTGAGAAAGAGTTTGTAAGGAGTTTGTATGAACATTCCTATGAAAAATATTGGGAAATTGAAGACAAAGTTACAGGAATGCAAAAAAGAGTTTGCAGTTTGCAAGATGAGTTTAGTATCAGTACAGTAATTGAAGATAACGACGCACGAGCTTTAATGGCAGCCACGGCGTTAAATTCATGTAAAGAAACCCTAAATAAGTTGAAAGAGGTACAGTCACGATCATCTGAGGAAGCTAGAGAAGCATACCAAAAGGTTAAGGAAGTTCATTACAAATTTGAAAACCTTAGAGGTAACTTCGTTTCCAAGCAAACAAATCAGGGAGATGAAAAAACAGAAACAAAAAGTAAAGATGAAGAAGAGATAGCTAGCTTTGAAAAAGATATGCTTGAACATGATATAGGGATGTTGCAAGAGAAGATTAAGGAAAAGCTTGAGGAAGATTCGGGAAACTCGCTTACTATGACAGAAATTGCAGAGATGATCGATGAGCTTGTAGGTAAGGTTGTTAGTTTGGAAACGGCAGTTACTTCTCAGAATGGATTGGTGAAGAGACTAAGATCAGAAGCAGATGAACTTCAAACAAATATACAAAGCTTAGAAGAGGATAAGGAAATGTTGATTGAAGATTCAGAAAATAGTAACAAGAAGATGAAAGAATTGGAAGAGGAGTTGAAGAGAATTAAAACTCTCAACAAAAGTGTCGAAATGCAAGATAACAGCCTCAAAACACACTTTCATGAAGCTAATTTTAATCTTGAGCATCTTTCAGGAAAACTGAAAAATGTGAAACTAGATGAGGAAGCGGAGAATTTGGTACTTAACAAGAATACGAGTTTTTCTAATGGAAAACCAAGTGAGGATTTTGAAAAACCTGTAGATGAACTGTCTAATAATAATTTAGCAATCGTGAATGATGCTAAGGAAGATCGTGCCGAAAATATCGGTGAAGTCGAAAATGAAGATGATAAGTCTAGATTGAAGAATAATATTGATTTTAGGACTGAAGGTGTGCAAGATCTAACACAACAGGATAAAGATGATTTCTCTGAGACAATACGTAATGTTAAAGTTGAATCACTTGATCTGGAAACTAAGGAGGAAAAAGATCAAACTAAATTGAATCAGATGTTTGTAAATGGATCAGATGAAAGAGAAAAGATTATGTTGGAGGAGTACACATCAGTTTTGAAGAACTATAACGATGTAACGGGAAAGCTCAACAATGTGGAGAATAAAAATCGAAACAGCATTTTTGAATTGGCACTTAAGTATGCATATCTGCAGGTAAGGGAACTGAAGAATGTAGTTGCCACTAAGGATGAAGAGATAAACATTTTACAAAATAAGCTTACCTATTCAGAAACAAATCCGGATGAAAGTCCTCGCACCACTCTAACCGAAGAAGCGCCTCTTGAAAATGCGGTTCAAGGAGATAACAGGGAGGGTACTGAAATTCCAGCTTCAGATATAGCTAGTACTTCTTTAGAAGATCAACACCAACATGTTGAAAACACAGGAAATATCGATATGTCATCAATTGGAAAGACAAGATTTTTTGTGGTGAGAGAAAGACAAATTGACAAAGACCATTCCCTTTCACTGTTAGAAAAGAAATTCCGCTTCGAAATTGATGGTTTGCTTGAGGAGAATTTAGAATTCTGGTTGAGGTTTAGCACTTCAGTTCATCAAATTCAAAAGTTCCAACAATCTTTACAGGACTTAAAAGTAGAACTAAGAAAAATAAAGCAGAATAACAATTTGTCGGATAACAAGATCGCTTCAAAAGCTGTACAGTCAGAAATAAAGCCAATATTTAGACATTTGAGAGAAATAAGAACTGAGTTATCATTATGGTTAGAACACAATGAAGTATTGCAGGATGATTTACAAGCTAGACATCCATCAATGTGTAGCTTACAAGATGAAATAGCAAGTGCTGGGAATCCAGATTCATCGTCAAAAAGAGTAGAACTTAGTGAGCATCAAGCTGCAAAGTTTCAAGGCGAAGTTCTCAACATGAAACAAGAAATCAACAAGGTTTCTAGTGAACTACAAGAAGGTTTGAGTTATGTAAAAGGACTTAAAAATGAAGTTGAAAAAATACTTGAAGAATTGAGTCAAGCAATGGGAGATAACAATCATGATAAAAATTCCACAAGTCGCGCTAGAATGCCTTTGAGGTCTTTCTTATTCGGAATCAAGTTGAAGAAACAAAGGCAATCAATGTTTGCATGTGTAAATCCAGCACTACAGAGACAATACAGTGATCTAGCAGAAGCTAATGATGCCCCAATATAG 2907 0.3619 MLRRAATNAYSWWWVSHIRTKQSKWLEQSLQDMEEIVAEALKIIDDNGDSFAQRAEMYYRKRPELINFVEEAFRAYRALAEKYDHLSKELQSANRTIATVFPEQVHYRIDEDEDEESVPETNSLPPNPNNQTEKQCNIPKPPSIPKKVFRSQSMLLSRKGTHRRSVSSEKSVSNPTIQCSGLSKVEALAEIDKLQKEILALQTEKEFVRSLYEHSYEKYWEIEDKVTGMQKRVCSLQDEFSISTVIEDNDARALMAATALNSCKETLNKLKEVQSRSSEEAREAYQKVKEVHYKFENLRGNFVSKQTNQGDEKTETKSKDEEEIASFEKDMLEHDIGMLQEKIKEKLEEDSGNSLTMTEIAEMIDELVGKVVSLETAVTSQNGLVKRLRSEADELQTNIQSLEEDKEMLIEDSENSNKKMKELEEELKRIKTLNKSVEMQDNSLKTHFHEANFNLEHLSGKLKNVKLDEEAENLVLNKNTSFSNGKPSEDFEKPVDELSNNNLAIVNDAKEDRAENIGEVENEDDKSRLKNNIDFRTEGVQDLTQQDKDDFSETIRNVKVESLDLETKEEKDQTKLNQMFVNGSDEREKIMLEEYTSVLKNYNDVTGKLNNVENKNRNSIFELALKYAYLQVRELKNVVATKDEEINILQNKLTYSETNPDESPRTTLTEEAPLENAVQGDNREGTEIPASDIASTSLEDQHQHVENTGNIDMSSIGKTRFFVVRERQIDKDHSLSLLEKKFRFEIDGLLEENLEFWLRFSTSVHQIQKFQQSLQDLKVELRKIKQNNNLSDNKIASKAVQSEIKPIFRHLREIRTELSLWLEHNEVLQDDLQARHPSMCSLQDEIASAGNPDSSSKRVELSEHQAAKFQGEVLNMKQEINKVSSELQEGLSYVKGLKNEVEKILEELSQAMGDNNHDKNSTSRARMPLRSFLFGIKLKKQRQSMFACVNPALQRQYSDLAEANDAPI* 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3563 968 Coils Coil 632 652 - -
Mtr3g3563 968 Coils Coil 894 914 - -
Mtr3g3563 968 PANTHER PROTEIN NETWORKED 2A 1 960 - -
Mtr3g3563 968 Pfam KIP1-like protein 11 84 IPR011684 GO:0003779
Mtr3g3563 968 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 90 IPR011684 GO:0003779
Mtr3g3563 968 Coils Coil 767 794 - -
Mtr3g3563 968 MobiDBLite consensus disorder prediction 657 686 - -
Mtr3g3563 968 Coils Coil 329 349 - -
Mtr3g3563 968 PANTHER PROTEIN NETWORKED 2D 1 960 - -
Mtr3g3563 968 MobiDBLite consensus disorder prediction 657 673 - -
Mtr3g3563 968 Coils Coil 184 211 - -
Mtr3g3563 968 Coils Coil 385 440 - -
Mtr3g3563 968 MobiDBLite consensus disorder prediction 110 146 - -
Mtr3g3563 968 MobiDBLite consensus disorder prediction 120 138 - -
Mtr3g3563 968 Coils Coil 69 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3563 Mtr-Chr3 49492083 49497939 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3563 - - ccaj:109795802 1097.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3563 3 49492083 49497939 Mtr3g3563 3 49492083 49497939 ECH
Mtr5g2240 5 29318186 29321758 Mtr3g3563 3 49492083 49497939 PCT