Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2188 ATGCAGAAACGGAAATTCATTTCGTTGGTATTGTTGAGGAAGTTGTTAACTGCAGCGATTATCTCAATTACTTTTCTTGCTCTATTCACTGGTCATTTACACATTCCTTCTTCTAAGGATCACAAGTTCAATAACAAGTTCCCTACGGTTCAAAACTTGCAACGGACACAAGAGCTAGCTCCACCCCATTTATCCAAACTACCACTTTCTACTTCCAAGTTGAATCGTTTAAGAGGGGATTCTGATTACGTGAAGCTGTGGAAGCCTCCATCAAATCGTGGGTTTCTTCCTTGTACAAAGCCTACTCCTAATTACACCGCTCCTGCTGAGTCACGTGGATATCTTTTAGTTCATACAAATGGTGGGCTCAACCAAATGCGTTCTGGGATATGTGATATGGTAGCTGTAGCTCGTATCATAAATGCTACTCTTGTAATTCCAGAACTTGATAAAAGATCATTTTGGCAAGATACTAGCAATTTCTCTGATGTTTTCGATGAAGAGCATTTTATTAATTCTCTAGCTAACGATGTAAAGATCATTAAGAAGCTTCCCATTGAACTGGTAATGGTTAATGAAACCGGAATGGTTAAGCAGCAATTCAGAAGCTGGTCTGGCATGGATTACTATGAGAATGAAATTGCGAGATTGTGGGAAGATCACGAAGTTATTCGTGCTTCAAAATCCGATTCACGGCTAGCGAACAACAATCTACCTCCAGACATTCAAAAGCTTCGTTGCCGAGCTTGCTATGAAGCACTCCGTTTCTCTCCTCGTATTGAACAAATAGGAAAGTTGTTGGTGGAAAGAATGAGGTCACGGGGTCCATATATTGCCTTGCATTTACGTTATGAGAAGGATATGCTTGCATTTAGTGGGTGTACGCATGATTTATCTCTAGATGAAGCTGAAGAGCTACGGATTATCAGAGAGAACATTTCTTATTGGAAAGTAAAAGATATTGATCCCGTAGAACAGAGGTCCAAAGGGTTTTGCCCCTTAACACCAAAGGAAGTTGGAATTTTTCTTACTGCTCTTGGATATCCATCAAAGACGCCGATATATATTGCTGCTGGAGAGATTTATGGGGGTGAGTCCCATATGGCTGAACTGCGATCCCGTTATCCATTGTTAATGAGCAAGGAAACGTTGGCATCCATTGAGGAGCTTGAACCCTTTTTTAATCATGCTTCTCAAATGGCTGCTCTTGACTATATTGTATCTATCGAGAGTGATGTATTTATACCCTCTTATTCTGGAAACATGGCAAGGGCTGTTGAAGGTCATCGCCGTTTTCTTGGACGTGGTCGATCAATATCTCCGGATAGGAAAGCCCTTGTTCGTCTCTTTGATAAACTAGATCAGGGAACAATGACTGAGGGGAAAAAACTGTCAAATAGGATTATCGATCTCCACATTAGACGACTTGGCTCCCCCAGGAAAAGAAAAGGACCAATTTCTGGAACAAAGGGCATGGACAGGTTTCGCTCAGAAGAAACCTTTTATGCTAATCCCTTACCTGATTGTTTATGCCGGACAGAACCACCGTCCCGAAACATCTCTGACATTATCAAGTAG 1578 0.4138 MQKRKFISLVLLRKLLTAAIISITFLALFTGHLHIPSSKDHKFNNKFPTVQNLQRTQELAPPHLSKLPLSTSKLNRLRGDSDYVKLWKPPSNRGFLPCTKPTPNYTAPAESRGYLLVHTNGGLNQMRSGICDMVAVARIINATLVIPELDKRSFWQDTSNFSDVFDEEHFINSLANDVKIIKKLPIELVMVNETGMVKQQFRSWSGMDYYENEIARLWEDHEVIRASKSDSRLANNNLPPDIQKLRCRACYEALRFSPRIEQIGKLLVERMRSRGPYIALHLRYEKDMLAFSGCTHDLSLDEAEELRIIRENISYWKVKDIDPVEQRSKGFCPLTPKEVGIFLTALGYPSKTPIYIAAGEIYGGESHMAELRSRYPLLMSKETLASIEELEPFFNHASQMAALDYIVSIESDVFIPSYSGNMARAVEGHRRFLGRGRSISPDRKALVRLFDKLDQGTMTEGKKLSNRIIDLHIRRLGSPRKRKGPISGTKGMDRFRSEETFYANPLPDCLCRTEPPSRNISDIIK* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2188 525 PANTHER OS02G0726500 PROTEIN-RELATED 4 522 - -
Mtr5g2188 525 PANTHER AUXIN-INDEPENDENT GROWTH PROMOTER-LIKE PROTEIN 4 522 - -
Mtr5g2188 525 Pfam GDP-fucose protein O-fucosyltransferase 114 432 IPR019378 -
Mtr5g2188 525 PIRSF UCP009360 1 515 IPR024709 -
Mtr5g2188 525 CDD O-FucT_plant 114 438 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2188 Mtr-Chr5 28491330 28498578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2188 58 515 Miscellaneous Gene Families AT1G22460 69.869 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2188 - - gmx:100795727 879.782
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2188 5 28491330 28498578 Mtr5g2188 5 28491330 28498578 ECH
Mtr5g2188 5 28491330 28498578 Mtr3g3520 3 49047524 49051642 PCT