Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3520 ATGCAGAAACGCAGAAAAGTTTCATTGGCCATTCTAATAAGGAGATTCCTCGGTGCAATCATTCTTTCAATAACCATTACTTGTTTCTTCTTTGTTCATGTGCACGTATCAACTTCTCCAACTGATCCTAATAACTTCAATGAAAAGATTCACATGTTTCGTAACCTTCAAAGCTGGACCCGAGAGTTTGTTCCACCCCATTCATCTAAGGCTCCACCCTCTGCTCCCAAGTTGAATGATTCAAGTGGGGATCCAGACTATGAGAAACTATGGAAGCCACCTCCAAATCATGGGTTTCTACCCTGTACAAAGCCTACTCCTAACTACACTACTCCTGAAAATTCACAAGGTTACCTCCTAGTTCATACAAATGGAGGACTCAACCAAATGCGCGCCGGGATATGTGATATGGTAGCTATAGCTCGCATTATAAATGCTACTCTTGTAATTCCAGAACTTGATAAAAAGTCATTTTGGCAAGATAGTAGCATTTTCTCAGACATCTTTGACGAAAAGAGGTTTATTAGTTCTCTTGCTGATGATATAAAAATCATTAACAAACTTCCCAAGGAGCTGGCTAATGCCCCTAAAATGGTGAAACAATTCAAAAGCTGGTCTGGTATGGATTACTATCAAAATGAGATTGCAGCCCTTTGGGATAATTTCAAAGTTATTCAAGCTTCCAAATCAGATTCTCGACTAGCAAATAACCATCTACCTCAAGATATTCAAAAGCTTCGCTGCCGTGCTTGTTATGAAGCTCTTCGTTTTTCTCCTCGCATTGAACAGATGGGGAAGATATTGGTGGAGAGGATGAGATCATATGGTCCTTATATCACATTACACTTGCGCTATGAGAAGGATATGCTTGCATTCAGCGGCTGCACGCATGATTTATCAACTTCTGAGGCCAAGGAACTACGGATTATCAGAGAGAATACTACTTATTGGAAAAGAAAGCACATCGATCCAAAAGAAGAGAGGGCCAAAGGGTATTGTCCCTTAACTCCAAAGGAAGTTGGAATTTTCCTTAGTGCTCTTGGATACCCTGCAAAGACTCCAATATATATTGCTGCAGGGGAGATATATGGGGGTGAATCCCATATGACTGAATTGCGATCACGCTATCCCTTTTTAATGAGCAAGGAAAAGTTGGCATCTATTGAAGAGCTTGAACCATTTTCTAATCATGCGTCGCAAATGGCTGCTCTTGACTATATTGTATCTGTTGAAAGTGATGTATTTGTACATTCTTACCCTGGCAACATGGCGCGAGCGGTTGAAGGCCATCGTCGTTTTCTTGGGAGAGGAAGAACCATTTCTCCAGATAGGAAAGCTCTCGTTCGTCTGTTCGATAAACTGGCGATTGGATCAATAACTGAGGGGGAACAACTGTCCAAAAAAGTGAATGATCTCCACAAAGGAAGGGTTGGCTTATTAAGGAAGAGAAAAGGACCCATTCCTGGAACAAAGGGAGTGGACAGGTTTCGTTCAGAAGAAACATTTTATGCAAATCCTTTACCTGATTGTTTATGTCGTAAAGAATCACCACCTACAGTATAA 1563 0.4101 MQKRRKVSLAILIRRFLGAIILSITITCFFFVHVHVSTSPTDPNNFNEKIHMFRNLQSWTREFVPPHSSKAPPSAPKLNDSSGDPDYEKLWKPPPNHGFLPCTKPTPNYTTPENSQGYLLVHTNGGLNQMRAGICDMVAIARIINATLVIPELDKKSFWQDSSIFSDIFDEKRFISSLADDIKIINKLPKELANAPKMVKQFKSWSGMDYYQNEIAALWDNFKVIQASKSDSRLANNHLPQDIQKLRCRACYEALRFSPRIEQMGKILVERMRSYGPYITLHLRYEKDMLAFSGCTHDLSTSEAKELRIIRENTTYWKRKHIDPKEERAKGYCPLTPKEVGIFLSALGYPAKTPIYIAAGEIYGGESHMTELRSRYPFLMSKEKLASIEELEPFSNHASQMAALDYIVSVESDVFVHSYPGNMARAVEGHRRFLGRGRTISPDRKALVRLFDKLAIGSITEGEQLSKKVNDLHKGRVGLLRKRKGPIPGTKGVDRFRSEETFYANPLPDCLCRKESPPTV* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3520 520 MobiDBLite consensus disorder prediction 64 87 - -
Mtr3g3520 520 PANTHER OS02G0726500 PROTEIN-RELATED 3 518 - -
Mtr3g3520 520 PIRSF UCP009360 1 516 IPR024709 -
Mtr3g3520 520 CDD O-FucT_plant 118 439 IPR024709 -
Mtr3g3520 520 Pfam GDP-fucose protein O-fucosyltransferase 118 433 IPR019378 -
Mtr3g3520 520 PANTHER AUXIN-INDEPENDENT GROWTH PROMOTER-LIKE PROTEIN 3 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3520 Mtr-Chr3 49047524 49051642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3520 62 515 Miscellaneous Gene Families AT1G22460 68.282 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3520 - - gmx:100807411 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3520 3 49047524 49051642 Mtr3g3520 3 49047524 49051642 ECH
Mtr5g2188 5 28491330 28498578 Mtr3g3520 3 49047524 49051642 PCT