Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2128 ATGGGTCACTTTTCCATCACCATTACTTTCATTTTTCTCTTCTTAACTCGCTACCACCGACTCGTTCATGCCGATTCACTTGCTACTAATGTACCCCCTTACTCCTGTGACACCTCCAACCCACTTACAAAATCCTTTCCATTCTGCAATCTCAACCTTACCATCACTCAAAGAGCAAAAGACATCGTGTCACGGCTCACATTGGATGAGAAAATCTCTCAACTCGTTAACACAGCTCCTGCCATTCCTCGACTCGGTATACCGAGTTACCAATGGTGGAATGAAGCTTTGCATGGTGTTTCTTATGTTGGTAAGGGGATAAGATTGAATGGTAGTATTACAGCTGCAACTAGTTTCCCTCAAATTATTCTCATAGCAGCTTCTTTTGATCCCAAACTTTGGTACCGAATCAGTAAGGTGATTGGAACTGAGGCTAGAGGAGTGTACAATGCTGGACAAGCTCAAGGGATGACGTTTTGGGCACCAAACATAAACATATTTAGGGACCCAAGATGGGGAAGAGGACAAGAAACAGCTGGTGAAGATCCTTTGGTAAATTCAAAGTATGGTGTTTCCTATGTGAGAGGACTTCAAGGTGATTCCTTTGAAGGTGGGAAACTGATTGGAGGTCGTCTTAAAGCTTCTGCTTGTTGCAAACACTTTACTGCCTATGATTTGGAAAATTGGAAGGGTGTGAATCGTTATGTTTTCGATGCCAAAGTTACTTTACAAGATTTGGCAGATACATATCAACCCTCATTTCATAGTTGCGTGGTACAAGGACGATCTAGTGGAATCATGTGTGCTTACAACCGTGTCAATGGAGTTCCAAACTGTGCAGATTACAATCTTTTAACCAATACGGCAAGGAAAAAATGGAATTTCAATGGGTATATTGCGTCGGATTGTGACGCAGTTCGATTCATATATGAAAAACAAGGTTATGCAAAAACACCAGAGGATGTTGTAGCCGATGTACTTCGAGCTGGGATGGACGTAGAGTGTGGTAACTACATGACAAAGCATGCAAAGTCAGCAGTATTACAAAAAAAAATTCCTATATCTCAAATCGACCGTGCCCTACACAATCTATTCACCATTAGAATAAGACTAGGCTTGTTTGATGGGAATCCAACCAAACTCCAATATGGCAGAATTGGTCCAAATCAAGTATGCTCTAAAGAAAACCTAGACCTTGCTCTTGAAGCTGCAAGAAGTGGCATTGTACTTTTAAAAAACACTGCCTCAATTCTCCCACTTCCAAGAGTAAATACCCTTGGAGTTATAGGCCCTAATGCCAATAAATCATCAATAGTTCTTTTAGGAAACTATTTTGGTCAACCTTGTAAACAAGTATCAATATTAAAAGGCTTTTACACTTATGCCAGCCAGACACATTATCGTTCTGGATGTACTGATGGAGTAAAGTGTGCTTCAGCCGAAATTGACCGAGCAGTTGAAGTTGCTAAAATAAGTGATTATGTTATTTTGGTTATGGGATTAGACCAAAGTCAAGAGACGGAAACACTTGATAGAGATCATTTAGAGTTGCCTGGAGGGAGACTACCAATGACATGGTACCCAAAAGATTTCATCAAAATACCAATGACAGACATGAGAATGAGAGCTGATCCATCATCAGGCTATCCCGGTAGAACCTACCGTTTCTACACAGGTCCAAAGGTCTACGAATTCGGCTATGGCCTAAGCTACTCAAATTATTCCTACAACTTCATTTCCGTCAAAAACAACAACATTCACATCAACCAATCAACCACTCATTCGATACTCGAAAACTCTGAAACAATCCGTTACAAACTTGTTTCGGAGTTAGGGAAGAAAGCATGTAAAACCATGTCAATTTCTGTAACATTGGGAATTACAAATACTGGAAGCATGGCTGGGAAACATCCTGTGTTGCTGTTTGTGAAACCAAAGAAAGGTAGAAATGGAAATCCAGTAAAACAGTTGGTAGGGTTTGAGAGTGTGACGGTAGAAGGGGGTGGAAAAGGTGAAGTTGGATTTGAAGTTAGTGTTTGTGAGCATCTTAGTAGAGCAAATGAGAGTGGTGTTAAGGTGATTGAAGAAGGTGGTTATTTGTTTCTTGTGGGAGAGTTAGAGTACTCAATAAATATCACTCTTTGA 2145 0.4047 MGHFSITITFIFLFLTRYHRLVHADSLATNVPPYSCDTSNPLTKSFPFCNLNLTITQRAKDIVSRLTLDEKISQLVNTAPAIPRLGIPSYQWWNEALHGVSYVGKGIRLNGSITAATSFPQIILIAASFDPKLWYRISKVIGTEARGVYNAGQAQGMTFWAPNINIFRDPRWGRGQETAGEDPLVNSKYGVSYVRGLQGDSFEGGKLIGGRLKASACCKHFTAYDLENWKGVNRYVFDAKVTLQDLADTYQPSFHSCVVQGRSSGIMCAYNRVNGVPNCADYNLLTNTARKKWNFNGYIASDCDAVRFIYEKQGYAKTPEDVVADVLRAGMDVECGNYMTKHAKSAVLQKKIPISQIDRALHNLFTIRIRLGLFDGNPTKLQYGRIGPNQVCSKENLDLALEAARSGIVLLKNTASILPLPRVNTLGVIGPNANKSSIVLLGNYFGQPCKQVSILKGFYTYASQTHYRSGCTDGVKCASAEIDRAVEVAKISDYVILVMGLDQSQETETLDRDHLELPGGRLPMTWYPKDFIKIPMTDMRMRADPSSGYPGRTYRFYTGPKVYEFGYGLSYSNYSYNFISVKNNNIHINQSTTHSILENSETIRYKLVSELGKKACKTMSISVTLGITNTGSMAGKHPVLLFVKPKKGRNGNPVKQLVGFESVTVEGGGKGEVGFEVSVCEHLSRANESGVKVIEEGGYLFLVGELEYSINITL* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2128 714 PANTHER GLYCOSIDE HYDROLASE FAMILY 3 PROTEIN 518 713 - -
Mtr5g2128 714 PANTHER GLYCOSIDE HYDROLASE FAMILY 3 PROTEIN 1 519 - -
Mtr5g2128 714 PANTHER SUGAR HYDROLASE-RELATED 1 519 IPR044993 GO:0009044|GO:0045493
Mtr5g2128 714 PANTHER SUGAR HYDROLASE-RELATED 518 713 IPR044993 GO:0009044|GO:0045493
Mtr5g2128 714 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 408 574 IPR036881 GO:0004553|GO:0005975
Mtr5g2128 714 Gene3D Immunoglobulins 601 713 IPR013783 -
Mtr5g2128 714 Gene3D - 393 518 IPR036881 GO:0004553|GO:0005975
Mtr5g2128 714 Pfam Glycosyl hydrolase family 3 C-terminal domain 408 518 IPR002772 GO:0004553|GO:0005975
Mtr5g2128 714 Pfam Fibronectin type III-like domain 639 705 IPR026891 -
Mtr5g2128 714 PRINTS Glycosyl hydrolase family 3 signature 119 138 IPR001764 GO:0004553|GO:0005975
Mtr5g2128 714 PRINTS Glycosyl hydrolase family 3 signature 214 230 IPR001764 GO:0004553|GO:0005975
Mtr5g2128 714 PRINTS Glycosyl hydrolase family 3 signature 288 306 IPR001764 GO:0004553|GO:0005975
Mtr5g2128 714 Gene3D - 58 382 IPR036962 GO:0004553|GO:0005975
Mtr5g2128 714 Gene3D - 519 572 IPR036881 GO:0004553|GO:0005975
Mtr5g2128 714 Pfam Glycosyl hydrolase family 3 N terminal domain 113 364 IPR001764 GO:0004553|GO:0005975
Mtr5g2128 714 SUPERFAMILY (Trans)glycosidases 46 406 IPR017853 -
Mtr5g2128 714 SMART Fn3_like_2 637 707 IPR026891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2128 Mtr-Chr5 27435337 27440939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2128 32 714 Glycoside Hydrolase AT1G78060 54.860 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2128 - - gmx:100812757 873.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2128 5 27435337 27440939 Mtr3g2318 3 36913279 36918981 PCT