Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2318 ATGGCCCTCTCATCAACCTTTACCTTTGTCACCATCATTTCCCTTTTCCTCACTCTCACTTACTCAGTCCTTGCTCAGCTACCACCATTTGCTTGTGATTATTCAAACCCATCAACCAGATCCTATCCATTTTGCAACCCAAAACTTCCCATCACACAAAGAACCAAAGACCTTGTTTCAAGACTCACATTGGATGAGAAACTTGCTCAACTAGTTAACTCAGCTCCTCCCATTCCTAGACTTGGTATCCCTGCTTATGAATGGTGGAGTGAAGCACTTCATGGAATTGGTAATGTTGGACGTGGGATCTTCTTCAATGGAAGTATCACTTCAGCTACTAGCTTCCCTCAAGTCATTCTTACTGCAGCTAGCTTTGATTCTCATCTTTGGTACCGTATCGGTCAGGCAATTGGGGTTGAAGCGAGAGCAATATACAATGGAGGACAAGCAATGGGGATGACATTTTGGGCACCAAACATAAACATATTCAGGGATCCAAGATGGGGGAGAGGACAAGAAACAGCTGGTGAAGATCCTATGATGACTTCTAACTATGCTGTTTCCTATGTTAGAGGACTTCAAGGTGATTCTTTTCAAGGAGGTAAATTGAGGGGACACCTTCAAGCTTCTGCTTGTTGCAAACATTTCACTGCCTATGATTTGGACAATTGGAAGGGTGTTAATCGCTTTCACTTCGATGCTCGCGTGAGTTTGCAAGATTTAGCAGACACATATCAACCACCATTTCGTAGTTGCATTGAGCAAGGACGGGCTAGTGGAATAATGTGTGCTTATAACCGTGTAAATGGAATTCCAAGTTGTGCCGATTTCAATCTCTTAACGAATACTGTTAGAAAACAATGGGAATTCCACGGGTATATTGTGTCAGATTGTGGAGCTGTTGGGATCATACATGATGAGCAAGGGTATGCAAAATCAGCAGAGGATGCTGTAGCTGATGTTCTTCATGCTGGGATGGATTTAGAATGTGGAAGTTATTTGACAGACCATGCAAAATCGGCAGTGCAACAGAAAAAATTACCTATAGTTCGAATAGACCGTGCCCTTCACAATCTATTTTCAATTAGAATAAGGCTAGGCCAATTTGATGGAAATCCAGCAAAGCTTCCATTTGGAATGATTGGTCCCAACCATGTCTGTTCCGAAAATCATTTATATCTAGCTCTTGAAGCTGCAAGAAACGGCATTGTCCTTTTAAAGAACACTGCTTCACTTCTTCCACTTCCAAAAACTAGTATTTCCTTAGCAGTGATAGGTCCTAATGCCAATGCTTCCCCTCTAACTCTTCTAGGAAACTATGCTGGCCCTCCTTGTAAATCTATTACGATACTTCAAGGGTTTCAACACTATGTTAAGAACGCTGTTTTTCACCCTGGTTGTGATGGTGGACCAAAGTGTGCTTCGGCTCCAATAGACAAGGCAGTGAAAGTTGCTAAGAATGCGGATTATGTTGTTCTTGTTATGGGATTGGATCAAAGTGTAGAGAGGGAAGAGCGTGATCGTGTTCATCTTGACTTGCCAGGCAAGCAACTTGAGCTCATTAACAGTGTTGCCAAAGCTTCTAAGAGACCGGTTATTTTGGTGCTCCTTTGTGGAGGTCCTATTGATATTAGTTCAGCTAAAAATAACGATAAAATTGGAGGTATTATCTGGGCTGGTTATCCGGGTGAACTCGGAGGCATTGCACTTGCACAGATTATCTTCGGGGATCACAATCCAGGAGGAAGACTACCAATTACTTGGTACCCAAAAGATTACATTAAAGTTCCAATGACAGACATGAGGATGAGAGCTGATCCCACAACCGGCTATCCAGGAAGAACTTACAGATTTTACAAGGGTCCTACAGTATATGAATTTGGCCATGGACTAAGCTACACAAAATATTCCTACGAGTTTGTTTCCGTTACACATGACAAACTTCATTTCAATCAATCGTCCACTCATTTGATGACTGAAAATTCAGAAACTATACGGTACAAATTAGTTTCAGAGTTGGATGAAGAAACCTGCAAAAGCATGTCGGTCTCAGTCACTGTTGGAGTTAAAAACCATGGAAACATTGTAGGGAGGCACCCTATATTGCTGTTTATGAGACCACAAAAACATCGAACCAGAAGTCCTATGAAACAATTGGTAGGTTTTCATAGTTTGTTGTTAGATGCAGGGGAAATGAGCCATGTTGGATTTGAGCTTAGTCCTTGTGAGCATCTTAGTCGAGCGAACGAGGCTGGTTTGAAGATCATAGAAGAAGGGTCTCATTTGTTGCATGTGGGTGAAGAAGAGTACCTAATAGATATCATTGTTTGA 2331 0.4183 MALSSTFTFVTIISLFLTLTYSVLAQLPPFACDYSNPSTRSYPFCNPKLPITQRTKDLVSRLTLDEKLAQLVNSAPPIPRLGIPAYEWWSEALHGIGNVGRGIFFNGSITSATSFPQVILTAASFDSHLWYRIGQAIGVEARAIYNGGQAMGMTFWAPNINIFRDPRWGRGQETAGEDPMMTSNYAVSYVRGLQGDSFQGGKLRGHLQASACCKHFTAYDLDNWKGVNRFHFDARVSLQDLADTYQPPFRSCIEQGRASGIMCAYNRVNGIPSCADFNLLTNTVRKQWEFHGYIVSDCGAVGIIHDEQGYAKSAEDAVADVLHAGMDLECGSYLTDHAKSAVQQKKLPIVRIDRALHNLFSIRIRLGQFDGNPAKLPFGMIGPNHVCSENHLYLALEAARNGIVLLKNTASLLPLPKTSISLAVIGPNANASPLTLLGNYAGPPCKSITILQGFQHYVKNAVFHPGCDGGPKCASAPIDKAVKVAKNADYVVLVMGLDQSVEREERDRVHLDLPGKQLELINSVAKASKRPVILVLLCGGPIDISSAKNNDKIGGIIWAGYPGELGGIALAQIIFGDHNPGGRLPITWYPKDYIKVPMTDMRMRADPTTGYPGRTYRFYKGPTVYEFGHGLSYTKYSYEFVSVTHDKLHFNQSSTHLMTENSETIRYKLVSELDEETCKSMSVSVTVGVKNHGNIVGRHPILLFMRPQKHRTRSPMKQLVGFHSLLLDAGEMSHVGFELSPCEHLSRANEAGLKIIEEGSHLLHVGEEEYLIDIIV* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2318 776 PRINTS Glycosyl hydrolase family 3 signature 115 134 IPR001764 GO:0004553|GO:0005975
Mtr3g2318 776 PRINTS Glycosyl hydrolase family 3 signature 209 225 IPR001764 GO:0004553|GO:0005975
Mtr3g2318 776 PRINTS Glycosyl hydrolase family 3 signature 283 301 IPR001764 GO:0004553|GO:0005975
Mtr3g2318 776 Pfam Fibronectin type III-like domain 702 767 IPR026891 -
Mtr3g2318 776 Pfam Glycosyl hydrolase family 3 N terminal domain 109 359 IPR001764 GO:0004553|GO:0005975
Mtr3g2318 776 SMART Fn3_like_2 699 769 IPR026891 -
Mtr3g2318 776 Gene3D - 389 634 IPR036881 GO:0004553|GO:0005975
Mtr3g2318 776 Gene3D Immunoglobulins 661 774 IPR013783 -
Mtr3g2318 776 PANTHER SUGAR HYDROLASE-RELATED 4 775 IPR044993 GO:0009044|GO:0045493
Mtr3g2318 776 SUPERFAMILY (Trans)glycosidases 42 401 IPR017853 -
Mtr3g2318 776 PANTHER GLYCOSIDE HYDROLASE FAMILY 3 PROTEIN 4 775 - -
Mtr3g2318 776 Pfam Glycosyl hydrolase family 3 C-terminal domain 403 633 IPR002772 GO:0004553|GO:0005975
Mtr3g2318 776 Gene3D - 54 376 IPR036962 GO:0004553|GO:0005975
Mtr3g2318 776 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 403 636 IPR036881 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2318 Mtr-Chr3 36913279 36918981 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2318 19 769 Glycoside Hydrolase AT1G78060 65.695 0.0 1029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2318 - - aprc:113867121 1358.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2318 3 36913279 36918981 Mtr3g2318 3 36913279 36918981 ECH
Mtr5g2128 5 27435337 27440939 Mtr3g2318 3 36913279 36918981 PCT